ynic-users November 2007

ynic-users@ynic.york.ac.uk

11 participants
15 discussions

Thursday lunchtime seminar
by Sam Johnson 12 Nov '07

12 Nov '07

Hello all, Elena Solesio has been visiting YNiC from the imaging centre in Madrid. This Thursday lunchtime, at 1:00pm, Elena will be giving a talk in YNiC open plan on some of the work she's been doing, entitled: Retroactive Interference Modulates Magnetic Brain Activity In Normal Aging: A Magnetoencephalography Study. As ever all are welcome to come along. Thanks, Sam

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Connectivity seminar this spring?
by Johan Carlin 12 Nov '07

12 Nov '07

Dear All, I would really like to see a Thursday session on connectivity - dynamic causal modelling, diffusion tensor imaging, etc. Is this interesting to anyone else? Best, Johan Carlin

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[Fwd: ScienceDirect Alert: Trends in Neurosciences, Vol. 30, Iss. 11, 2007]
by Tim Andrews 12 Nov '07

12 Nov '07

Paper on Bloodless MRI that might be of interest to some of you in the latest TINS -------- Original Message -------- Subject: ScienceDirect Alert: Trends in Neurosciences, Vol. 30, Iss. 11, 2007 Date: Sat, 10 Nov 2007 13:43:30 -0500 From: ScienceDirect Message Center <valert(a)prod.sciencedirect.com> To: ta505(a)york.ac.uk ScienceDirect <http://www.sciencedirect.com/science> New Volume/Issue is now available on ScienceDirect Trends in Neurosciences <http://www.sciencedirect.com/science/issue/4872-2007-999699988-673508> Trends in Neurosciences <http://www.sciencedirect.com/science/journal/01662236> Volume 30, Issue 11 <http://www.sciencedirect.com/science/issue/4872-2007-999699988-673508>, Pages 555-610 (November 2007) 1. Editorial Board <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Page i Review 2. From genes to pain: Nav1.7 and human pain disorders <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 555-563 Sulayman D. Dib-Hajj, Theodore R. Cummins, Joel A. Black and Stephen G. Waxman 3. Munc18-1 in secretion: lonely Munc joins SNARE team and takes control <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 564-572 Ruud F.G. Toonen and Matthijs Verhage 4. The TASK background K2P channels: chemo- and nutrient sensors <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 573-580 Fabrice Duprat, Inger Lauritzen, Amanda Patel and Eric Honoré 5. Phosphatase PTEN in neuronal injury and brain disorders <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 581-586 Ning Chang, Youssef H. El-Hayek, Everlyne Gomez and Qi Wan 6. The ubiquitin–proteasome pathway in health and disease of the nervous system <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 587-595 Ashok N. Hegde and Sudarshan C. Upadhya 7. Neuronal ‘On’ and ‘Off’ signals control microglia <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 596-602 Knut Biber, Harald Neumann, Kazuhide Inoue and Hendrikus W.G.M. Boddeke 8. Bloodless fMRI <http://www.sciencedirect.com/science?_ob=GatewayURL&_method=citationSearch&…> Pages 603-610 Alan Jasanoff Send my e-mail in plain text format <http://www.sciencedirect.com/science/account> Modify or Remove My Alerts <http://www.sciencedirect.com/science/alerts> Access the ScienceDirect Info site <http://www.info.sciencedirect.com> if you have questions about this message or other features of this service. This email has been sent to you by ScienceDirect, a division of Elsevier B.V., Radarweg 29, 1043 NX Amsterdam, The Netherlands, Tel.+31 20 485 3911. ScienceDirect respects your privacy and does not disclose, rent or sell your personal information to any non-affiliated third parties without your consent, except as may be stated in the ScienceDirect online privacy policy <http://www.sciencedirect.com/science/privacy>. By using email or alert services, you agree to comply with the ScienceDirect Terms and Conditions <http://www.sciencedirect.com/science/termsandcond>. To unsubscribe to alert services, please go to the Alerts <http://www.sciencedirect.com/science/alerts> page. Copyright © 2007 ScienceDirect. All rights reserved. Any unauthorized use, reproduction, or transfer of this message or its contents, in any medium, is strictly prohibited. ScienceDirect® is a registered trademark of Elsevier B.V. Delivery Job ID: 1929:126069537:1927:108342272 -- Dr Tim Andrews Department of Psychology University of York York, YO10 5DD UK Tel: 44-1904-434356 Fax: 44-1904-433181 http://www-users.york.ac.uk/~ta505/ http://www.york.ac.uk/depts/psych/www/admissions/cns/

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registration with MRI
by Tim Andrews 01 Nov '07

01 Nov '07

Dear All, Recently, we have had some problems with registration using FSL. Some of the registrations, particularly with the standard brain appear to be quite poor. Jodie, Claire and Andre have done some work on this recently and found that the best combination of registrations in FSL is Initial Structural: 15 degree search, 6 DOF Main Structural: 15 degree search, 6 DOF Standard Brain: 15 degree search, 12 DOF If you have any views on this, could you let us know. We have also noticed that the brain extraction tool, which is set as default on FEAT has not always been removing the skull from the EPI images. If you have been doing FEAT analysis, I would be grateful if you could let us know whether BET has been working for you. If this hasn't been happening, it could affect your registrations. A related issue, is that although structural brain images are automatically skull stripped using BET, FLAIR images are not. However, I believe that BET may be automatically applied to FLAIR images in the near future. :-) Cheers, Tim -- Dr Tim Andrews Department of Psychology University of York York, YO10 5DD UK Tel: 44-1904-434356 Fax: 44-1904-433181 http://www-users.york.ac.uk/~ta505/ http://www.york.ac.uk/depts/psych/www/admissions/cns/

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seminar today
by Gary Green 01 Nov '07

01 Nov '07

"Off-line consolidation during sleep and wakefulness" Dr Penny Lewis Psychology Department, University of Liverpool Date: 16:00. Thursday 01 November 2007 Location: YNiC Open Plan Host: Gary Green Programme: York Neuroimaging Centre Seminars All welcome Refreshments will be served after the seminar Penny Lewis will be in YNiC this afternoon if individuals would like to meet her. We will be taking Penny out to dinner after the seminar. If you would like to join us for dinner please contact Gary Green. -- Gary Green York Neuroimaging Centre The Biocentre York Science Park Innovation Way Heslington York YO10 5DG http://www.ynic.york.ac.uk tel. 01904 435349 fax 01904 435356 mobile 07986 778954

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ynic-users November 2007