#############################################################################
# Makefile for building: dsi_studio
# Generated by qmake (3.1) (Qt 5.11.3)
# Project:  ../src/dsi_studio.pro
# Template: app
# Command: /usr/lib/qt5/bin/qmake -o Makefile ../src/dsi_studio.pro
#############################################################################

MAKEFILE      = Makefile

####### Compiler, tools and options

CC            = gcc
CXX           = g++
DEFINES       = -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_CHARTS_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_CORE_LIB
CFLAGS        = -pipe -O2 -Wall -W -D_REENTRANT -fPIC $(DEFINES)
CXXFLAGS      = -pipe -fpermissive -O2 -std=gnu++11 -Wall -W -D_REENTRANT -fPIC $(DEFINES)
INCPATH       = -I../src -I. -I./plot -I../src/libs -I../src/libs/dsi -I../src/libs/tracking -I../src/libs/mapping -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtCharts -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -I. -isystem /usr/include/libdrm -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++
QMAKE         = /usr/lib/qt5/bin/qmake
DEL_FILE      = rm -f
CHK_DIR_EXISTS= test -d
MKDIR         = mkdir -p
COPY          = cp -f
COPY_FILE     = cp -f
COPY_DIR      = cp -f -R
INSTALL_FILE  = install -m 644 -p
INSTALL_PROGRAM = install -m 755 -p
INSTALL_DIR   = cp -f -R
QINSTALL      = /usr/lib/qt5/bin/qmake -install qinstall
QINSTALL_PROGRAM = /usr/lib/qt5/bin/qmake -install qinstall -exe
DEL_FILE      = rm -f
SYMLINK       = ln -f -s
DEL_DIR       = rmdir
MOVE          = mv -f
TAR           = tar -cf
COMPRESS      = gzip -9f
DISTNAME      = dsi_studio1.0.0
DISTDIR = /tmp/dsistudio/build/.tmp/dsi_studio1.0.0
LINK          = g++
LFLAGS        = -Wl,-O1
LIBS          = $(SUBLIBS) -lGLU -lz -lQt5OpenGL -lQt5Charts -lQt5Widgets -lQt5Gui -lQt5Core -lGL -lpthread 
AR            = ar cqs
RANLIB        = 
SED           = sed
STRIP         = strip

####### Output directory

OBJECTS_DIR   = ./

####### Files

SOURCES       = ../src/main.cpp \
		../src/mainwindow.cpp \
		../src/dicom/dicom_parser.cpp \
		../src/dicom/dwi_header.cpp \
		../src/libs/utility/prog_interface.cpp \
		../src/libs/dsi/dsi_interface_imp.cpp \
		../src/libs/tracking/interpolation_process.cpp \
		../src/libs/tracking/tract_cluster.cpp \
		../src/SliceModel.cpp \
		../src/tracking/tracking_window.cpp \
		../src/reconstruction/reconstruction_window.cpp \
		../src/tracking/slice_view_scene.cpp \
		../src/opengl/glwidget.cpp \
		../src/tracking/region/regiontablewidget.cpp \
		../src/tracking/region/Regions.cpp \
		../src/tracking/region/RegionModel.cpp \
		../src/libs/tracking/tract_model.cpp \
		../src/tracking/tract/tracttablewidget.cpp \
		../src/opengl/renderingtablewidget.cpp \
		../src/qcolorcombobox.cpp \
		../src/cmd/trk.cpp \
		../src/cmd/rec.cpp \
		../src/cmd/src.cpp \
		../src/libs/mapping/atlas.cpp \
		../src/cmd/ana.cpp \
		../src/view_image.cpp \
		../src/manual_alignment.cpp \
		../src/tracking/tract_report.cpp \
		../src/tracking/color_bar_dialog.cpp \
		../src/cmd/exp.cpp \
		../src/tracking/connectivity_matrix_dialog.cpp \
		../src/libs/dsi/tessellated_icosahedron.cpp \
		../src/cmd/atl.cpp \
		../src/tracking/atlasdialog.cpp \
		../src/cmd/vis.cpp \
		../src/filebrowser.cpp \
		../src/qcompletelineedit.cpp \
		../src/libs/tracking/fib_data.cpp \
		../src/libs/tracking/tracking_thread.cpp \
		../src/cmd/ren.cpp \
		../src/libs/mapping/connectometry_db.cpp \
		../src/connectometry/createdbdialog.cpp \
		../src/connectometry/individual_connectometry.cpp \
		../src/connectometry/match_db.cpp \
		../src/connectometry/db_window.cpp \
		../src/connectometry/group_connectometry.cpp \
		../src/connectometry/group_connectometry_analysis.cpp \
		../src/regtoolbox.cpp \
		../src/cmd/cnn.cpp \
		../src/cmd/qc.cpp \
		../src/libs/dsi/basic_voxel.cpp \
		../src/libs/dsi/image_model.cpp \
		../src/connectometry/nn_connectometry.cpp \
		../src/connectometry/nn_connectometry_analysis.cpp \
		../src/cmd/reg.cpp \
		../src/auto_track.cpp qrc_icons.cpp \
		moc_mainwindow.cpp \
		moc_dicom_parser.cpp \
		moc_tracking_window.cpp \
		moc_reconstruction_window.cpp \
		moc_slice_view_scene.cpp \
		moc_glwidget.cpp \
		moc_regiontablewidget.cpp \
		moc_tracttablewidget.cpp \
		moc_renderingtablewidget.cpp \
		moc_qcolorcombobox.cpp \
		moc_view_image.cpp \
		moc_manual_alignment.cpp \
		moc_tract_report.cpp \
		moc_color_bar_dialog.cpp \
		moc_connectivity_matrix_dialog.cpp \
		moc_atlasdialog.cpp \
		moc_filebrowser.cpp \
		moc_qcompletelineedit.cpp \
		moc_createdbdialog.cpp \
		moc_individual_connectometry.cpp \
		moc_match_db.cpp \
		moc_db_window.cpp \
		moc_group_connectometry.cpp \
		moc_regtoolbox.cpp \
		moc_nn_connectometry.cpp \
		moc_auto_track.cpp
OBJECTS       = main.o \
		mainwindow.o \
		dicom_parser.o \
		dwi_header.o \
		prog_interface.o \
		dsi_interface_imp.o \
		interpolation_process.o \
		tract_cluster.o \
		SliceModel.o \
		tracking_window.o \
		reconstruction_window.o \
		slice_view_scene.o \
		glwidget.o \
		regiontablewidget.o \
		Regions.o \
		RegionModel.o \
		tract_model.o \
		tracttablewidget.o \
		renderingtablewidget.o \
		qcolorcombobox.o \
		trk.o \
		rec.o \
		src.o \
		atlas.o \
		ana.o \
		view_image.o \
		manual_alignment.o \
		tract_report.o \
		color_bar_dialog.o \
		exp.o \
		connectivity_matrix_dialog.o \
		tessellated_icosahedron.o \
		atl.o \
		atlasdialog.o \
		vis.o \
		filebrowser.o \
		qcompletelineedit.o \
		fib_data.o \
		tracking_thread.o \
		ren.o \
		connectometry_db.o \
		createdbdialog.o \
		individual_connectometry.o \
		match_db.o \
		db_window.o \
		group_connectometry.o \
		group_connectometry_analysis.o \
		regtoolbox.o \
		cnn.o \
		qc.o \
		basic_voxel.o \
		image_model.o \
		nn_connectometry.o \
		nn_connectometry_analysis.o \
		reg.o \
		auto_track.o \
		qrc_icons.o \
		moc_mainwindow.o \
		moc_dicom_parser.o \
		moc_tracking_window.o \
		moc_reconstruction_window.o \
		moc_slice_view_scene.o \
		moc_glwidget.o \
		moc_regiontablewidget.o \
		moc_tracttablewidget.o \
		moc_renderingtablewidget.o \
		moc_qcolorcombobox.o \
		moc_view_image.o \
		moc_manual_alignment.o \
		moc_tract_report.o \
		moc_color_bar_dialog.o \
		moc_connectivity_matrix_dialog.o \
		moc_atlasdialog.o \
		moc_filebrowser.o \
		moc_qcompletelineedit.o \
		moc_createdbdialog.o \
		moc_individual_connectometry.o \
		moc_match_db.o \
		moc_db_window.o \
		moc_group_connectometry.o \
		moc_regtoolbox.o \
		moc_nn_connectometry.o \
		moc_auto_track.o
DIST          = ../src/shader_fragment2.txt \
		../src/shader_vertex2.txt \
		../src/COPYRIGHT \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_pre.prf \
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		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/linux.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/sanitize.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base-unix.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-base.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-unix.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/qconfig.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_accessibility_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_bootstrap_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_charts.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_devicediscovery_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_edid_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_egl_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfs_kms_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfsdeviceintegration_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eventdispatcher_support_private.pri \
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		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_glx_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_input_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_kms_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_linuxaccessibility_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_platformcompositor_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_service_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_theme_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_vulkan_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xcb_qpa_lib_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_functions.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_config.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_post.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exclusive_builds.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/toolchain.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_pre.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resolve_config.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_post.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/warn_on.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resources.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/moc.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/opengl.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/uic.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/thread.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qmake_use.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/file_copies.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/testcase_targets.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exceptions.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/yacc.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/lex.prf \
		../src/dsi_studio.pro ../src/mainwindow.h \
		../src/dicom/dicom_parser.h \
		../src/dicom/dwi_header.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/libs/dsi/odf_process.hpp \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/gqi_process.hpp \
		../src/libs/dsi/gqi_mni_reconstruction.hpp \
		../src/libs/dsi/dti_process.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/SliceModel.h \
		../src/tracking/tracking_window.h \
		../src/reconstruction/reconstruction_window.h \
		../src/tracking/slice_view_scene.h \
		../src/opengl/glwidget.h \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/libs/tracking/tract_cluster.hpp \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/tract_model.hpp \
		../src/tracking/tract/tracttablewidget.h \
		../src/opengl/renderingtablewidget.h \
		../src/qcolorcombobox.h \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/mapping/atlas.hpp \
		../src/view_image.h \
		../src/libs/gzip_interface.hpp \
		../src/manual_alignment.h \
		../src/tracking/tract_report.hpp \
		../src/tracking/color_bar_dialog.hpp \
		../src/tracking/connectivity_matrix_dialog.h \
		../src/tracking/atlasdialog.h \
		../src/filebrowser.h \
		../src/program_option.hpp \
		../src/qcompletelineedit.h \
		../src/libs/mapping/connectometry_db.hpp \
		../src/connectometry/createdbdialog.h \
		../src/connectometry/individual_connectometry.hpp \
		../src/connectometry/match_db.h \
		../src/connectometry/db_window.h \
		../src/connectometry/group_connectometry.hpp \
		../src/connectometry/group_connectometry_analysis.h \
		../src/regtoolbox.h \
		../src/connectometry/nn_connectometry.h \
		../src/connectometry/nn_connectometry_analysis.h \
		../src/auto_track.h ../src/main.cpp \
		../src/mainwindow.cpp \
		../src/dicom/dicom_parser.cpp \
		../src/dicom/dwi_header.cpp \
		../src/libs/utility/prog_interface.cpp \
		../src/libs/dsi/dsi_interface_imp.cpp \
		../src/libs/tracking/interpolation_process.cpp \
		../src/libs/tracking/tract_cluster.cpp \
		../src/SliceModel.cpp \
		../src/tracking/tracking_window.cpp \
		../src/reconstruction/reconstruction_window.cpp \
		../src/tracking/slice_view_scene.cpp \
		../src/opengl/glwidget.cpp \
		../src/tracking/region/regiontablewidget.cpp \
		../src/tracking/region/Regions.cpp \
		../src/tracking/region/RegionModel.cpp \
		../src/libs/tracking/tract_model.cpp \
		../src/tracking/tract/tracttablewidget.cpp \
		../src/opengl/renderingtablewidget.cpp \
		../src/qcolorcombobox.cpp \
		../src/cmd/trk.cpp \
		../src/cmd/rec.cpp \
		../src/cmd/src.cpp \
		../src/libs/mapping/atlas.cpp \
		../src/cmd/ana.cpp \
		../src/view_image.cpp \
		../src/manual_alignment.cpp \
		../src/tracking/tract_report.cpp \
		../src/tracking/color_bar_dialog.cpp \
		../src/cmd/exp.cpp \
		../src/tracking/connectivity_matrix_dialog.cpp \
		../src/libs/dsi/tessellated_icosahedron.cpp \
		../src/cmd/atl.cpp \
		../src/tracking/atlasdialog.cpp \
		../src/cmd/vis.cpp \
		../src/filebrowser.cpp \
		../src/qcompletelineedit.cpp \
		../src/libs/tracking/fib_data.cpp \
		../src/libs/tracking/tracking_thread.cpp \
		../src/cmd/ren.cpp \
		../src/libs/mapping/connectometry_db.cpp \
		../src/connectometry/createdbdialog.cpp \
		../src/connectometry/individual_connectometry.cpp \
		../src/connectometry/match_db.cpp \
		../src/connectometry/db_window.cpp \
		../src/connectometry/group_connectometry.cpp \
		../src/connectometry/group_connectometry_analysis.cpp \
		../src/regtoolbox.cpp \
		../src/cmd/cnn.cpp \
		../src/cmd/qc.cpp \
		../src/libs/dsi/basic_voxel.cpp \
		../src/libs/dsi/image_model.cpp \
		../src/connectometry/nn_connectometry.cpp \
		../src/connectometry/nn_connectometry_analysis.cpp \
		../src/cmd/reg.cpp \
		../src/auto_track.cpp
QMAKE_TARGET  = dsi_studio
DESTDIR       = 
TARGET        = dsi_studio


first: all
####### Build rules

$(TARGET): ui_mainwindow.h ui_tracking_window.h ui_reconstruction_window.h ui_dicom_parser.h ui_view_image.h ui_manual_alignment.h ui_tract_report.h ui_color_bar_dialog.h ui_connectivity_matrix_dialog.h ui_atlasdialog.h ui_filebrowser.h ui_createdbdialog.h ui_individual_connectometry.h ui_match_db.h ui_db_window.h ui_group_connectometry.h ui_regtoolbox.h ui_nn_connectometry.h ui_auto_track.h $(OBJECTS)  
	$(LINK) $(LFLAGS) -o $(TARGET) $(OBJECTS) $(OBJCOMP) $(LIBS)

Makefile: ../src/dsi_studio.pro /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_pre.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/unix.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/linux.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/sanitize.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base-unix.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-base.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-unix.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/qconfig.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_accessibility_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_bootstrap_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_charts.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_devicediscovery_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_edid_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_egl_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfs_kms_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfsdeviceintegration_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eventdispatcher_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_fb_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_fontdatabase_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_glx_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_input_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_kms_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_linuxaccessibility_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_platformcompositor_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_service_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_theme_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_vulkan_support_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xcb_qpa_lib_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml_private.pri \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_functions.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_config.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_post.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exclusive_builds.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/toolchain.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_pre.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resolve_config.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_post.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/warn_on.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resources.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/moc.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/opengl.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/uic.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/thread.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qmake_use.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/file_copies.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/testcase_targets.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exceptions.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/yacc.prf \
		/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/lex.prf \
		../src/dsi_studio.pro \
		../src/icons.qrc \
		/usr/lib/x86_64-linux-gnu/libQt5OpenGL.prl \
		/usr/lib/x86_64-linux-gnu/libQt5Charts.prl \
		/usr/lib/x86_64-linux-gnu/libQt5Widgets.prl \
		/usr/lib/x86_64-linux-gnu/libQt5Gui.prl \
		/usr/lib/x86_64-linux-gnu/libQt5Core.prl
	$(QMAKE) -o Makefile ../src/dsi_studio.pro
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_pre.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/unix.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/linux.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/sanitize.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/gcc-base-unix.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-base.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/common/g++-unix.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/qconfig.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_accessibility_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_bootstrap_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_charts.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_concurrent_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_core_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_dbus_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_devicediscovery_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_edid_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_egl_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfs_kms_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eglfsdeviceintegration_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_eventdispatcher_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_fb_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_fontdatabase_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_glx_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_gui_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_input_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_kms_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_linuxaccessibility_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_network_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_opengl_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_openglextensions_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_platformcompositor_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_printsupport_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_service_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_sql_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_testlib_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_theme_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_vulkan_support_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_widgets_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xcb_qpa_lib_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/modules/qt_lib_xml_private.pri:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_functions.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt_config.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++/qmake.conf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/spec_post.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exclusive_builds.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/toolchain.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_pre.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resolve_config.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/default_post.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/warn_on.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qt.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/resources.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/moc.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/opengl.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/uic.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/unix/thread.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/qmake_use.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/file_copies.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/testcase_targets.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/exceptions.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/yacc.prf:
/usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/lex.prf:
../src/dsi_studio.pro:
../src/icons.qrc:
/usr/lib/x86_64-linux-gnu/libQt5OpenGL.prl:
/usr/lib/x86_64-linux-gnu/libQt5Charts.prl:
/usr/lib/x86_64-linux-gnu/libQt5Widgets.prl:
/usr/lib/x86_64-linux-gnu/libQt5Gui.prl:
/usr/lib/x86_64-linux-gnu/libQt5Core.prl:
qmake: FORCE
	@$(QMAKE) -o Makefile ../src/dsi_studio.pro

qmake_all: FORCE


all: Makefile $(TARGET)

dist: distdir FORCE
	(cd `dirname $(DISTDIR)` && $(TAR) $(DISTNAME).tar $(DISTNAME) && $(COMPRESS) $(DISTNAME).tar) && $(MOVE) `dirname $(DISTDIR)`/$(DISTNAME).tar.gz . && $(DEL_FILE) -r $(DISTDIR)

distdir: FORCE
	@test -d $(DISTDIR) || mkdir -p $(DISTDIR)
	$(COPY_FILE) --parents $(DIST) $(DISTDIR)/
	$(COPY_FILE) --parents ../src/icons.qrc $(DISTDIR)/
	$(COPY_FILE) --parents /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/data/dummy.cpp $(DISTDIR)/
	$(COPY_FILE) --parents ../src/mainwindow.h ../src/dicom/dicom_parser.h ../src/dicom/dwi_header.hpp ../src/libs/dsi/tessellated_icosahedron.hpp ../src/libs/dsi/odf_process.hpp ../src/libs/dsi/image_model.hpp ../src/libs/dsi/gqi_process.hpp ../src/libs/dsi/gqi_mni_reconstruction.hpp ../src/libs/dsi/dti_process.hpp ../src/libs/dsi/basic_voxel.hpp ../src/SliceModel.h ../src/tracking/tracking_window.h ../src/reconstruction/reconstruction_window.h ../src/tracking/slice_view_scene.h ../src/opengl/glwidget.h ../src/libs/tracking/tracking_method.hpp ../src/libs/tracking/roi.hpp ../src/libs/tracking/interpolation_process.hpp ../src/libs/tracking/fib_data.hpp ../src/libs/tracking/basic_process.hpp ../src/libs/tracking/tract_cluster.hpp ../src/tracking/region/regiontablewidget.h ../src/tracking/region/Regions.h ../src/tracking/region/RegionModel.h ../src/libs/tracking/tract_model.hpp ../src/tracking/tract/tracttablewidget.h ../src/opengl/renderingtablewidget.h ../src/qcolorcombobox.h ../src/libs/tracking/tracking_thread.hpp ../src/libs/prog_interface_static_link.h ../src/libs/mapping/atlas.hpp ../src/view_image.h ../src/libs/gzip_interface.hpp ../src/manual_alignment.h ../src/tracking/tract_report.hpp ../src/tracking/color_bar_dialog.hpp ../src/tracking/connectivity_matrix_dialog.h ../src/tracking/atlasdialog.h ../src/filebrowser.h ../src/program_option.hpp ../src/qcompletelineedit.h ../src/libs/mapping/connectometry_db.hpp ../src/connectometry/createdbdialog.h ../src/connectometry/individual_connectometry.hpp ../src/connectometry/match_db.h ../src/connectometry/db_window.h ../src/connectometry/group_connectometry.hpp ../src/connectometry/group_connectometry_analysis.h ../src/regtoolbox.h ../src/connectometry/nn_connectometry.h ../src/connectometry/nn_connectometry_analysis.h ../src/auto_track.h $(DISTDIR)/
	$(COPY_FILE) --parents ../src/main.cpp ../src/mainwindow.cpp ../src/dicom/dicom_parser.cpp ../src/dicom/dwi_header.cpp ../src/libs/utility/prog_interface.cpp ../src/libs/dsi/dsi_interface_imp.cpp ../src/libs/tracking/interpolation_process.cpp ../src/libs/tracking/tract_cluster.cpp ../src/SliceModel.cpp ../src/tracking/tracking_window.cpp ../src/reconstruction/reconstruction_window.cpp ../src/tracking/slice_view_scene.cpp ../src/opengl/glwidget.cpp ../src/tracking/region/regiontablewidget.cpp ../src/tracking/region/Regions.cpp ../src/tracking/region/RegionModel.cpp ../src/libs/tracking/tract_model.cpp ../src/tracking/tract/tracttablewidget.cpp ../src/opengl/renderingtablewidget.cpp ../src/qcolorcombobox.cpp ../src/cmd/trk.cpp ../src/cmd/rec.cpp ../src/cmd/src.cpp ../src/libs/mapping/atlas.cpp ../src/cmd/ana.cpp ../src/view_image.cpp ../src/manual_alignment.cpp ../src/tracking/tract_report.cpp ../src/tracking/color_bar_dialog.cpp ../src/cmd/exp.cpp ../src/tracking/connectivity_matrix_dialog.cpp ../src/libs/dsi/tessellated_icosahedron.cpp ../src/cmd/atl.cpp ../src/tracking/atlasdialog.cpp ../src/cmd/vis.cpp ../src/filebrowser.cpp ../src/qcompletelineedit.cpp ../src/libs/tracking/fib_data.cpp ../src/libs/tracking/tracking_thread.cpp ../src/cmd/ren.cpp ../src/libs/mapping/connectometry_db.cpp ../src/connectometry/createdbdialog.cpp ../src/connectometry/individual_connectometry.cpp ../src/connectometry/match_db.cpp ../src/connectometry/db_window.cpp ../src/connectometry/group_connectometry.cpp ../src/connectometry/group_connectometry_analysis.cpp ../src/regtoolbox.cpp ../src/cmd/cnn.cpp ../src/cmd/qc.cpp ../src/libs/dsi/basic_voxel.cpp ../src/libs/dsi/image_model.cpp ../src/connectometry/nn_connectometry.cpp ../src/connectometry/nn_connectometry_analysis.cpp ../src/cmd/reg.cpp ../src/auto_track.cpp $(DISTDIR)/
	$(COPY_FILE) --parents ../src/mainwindow.ui ../src/tracking/tracking_window.ui ../src/reconstruction/reconstruction_window.ui ../src/dicom/dicom_parser.ui ../src/view_image.ui ../src/manual_alignment.ui ../src/tracking/tract_report.ui ../src/tracking/color_bar_dialog.ui ../src/tracking/connectivity_matrix_dialog.ui ../src/tracking/atlasdialog.ui ../src/filebrowser.ui ../src/connectometry/createdbdialog.ui ../src/connectometry/individual_connectometry.ui ../src/connectometry/match_db.ui ../src/connectometry/db_window.ui ../src/connectometry/group_connectometry.ui ../src/regtoolbox.ui ../src/connectometry/nn_connectometry.ui ../src/auto_track.ui $(DISTDIR)/


clean: compiler_clean 
	-$(DEL_FILE) $(OBJECTS)
	-$(DEL_FILE) *~ core *.core


distclean: clean 
	-$(DEL_FILE) $(TARGET) 
	-$(DEL_FILE) .qmake.stash
	-$(DEL_FILE) Makefile


####### Sub-libraries

mocclean: compiler_moc_header_clean compiler_moc_objc_header_clean compiler_moc_source_clean

mocables: compiler_moc_header_make_all compiler_moc_objc_header_make_all compiler_moc_source_make_all

check: first

benchmark: first

compiler_rcc_make_all: qrc_icons.cpp
compiler_rcc_clean:
	-$(DEL_FILE) qrc_icons.cpp
qrc_icons.cpp: ../src/icons.qrc \
		/usr/lib/qt5/bin/rcc \
		../src/FreeSurferColorLUT.txt \
		../src/shader_fragment2.txt \
		../src/dicom_tag.txt \
		../src/shader_vertex.txt \
		../src/options.txt \
		../src/shader_vertex2.txt \
		../src/shader_fragment.txt \
		../src/icons/ajax-loader.gif \
		../src/dsi_studio.ico \
		../src/icons/up.xpm \
		../src/icons/slice.xpm \
		../src/icons/ball.xpm \
		../src/icons/add.xpm \
		../src/icons/fullscreen.xpm \
		../src/icons/rotate.xpm \
		../src/icons/preferences.xpm \
		../src/icons/down.xpm \
		../src/icons/rgb.xpm \
		../src/icons/add_surface.xpm \
		../src/icons/run.xpm \
		../src/icons/save.xpm \
		../src/icons/sag.xpm \
		../src/icons/curves.xpm \
		../src/icons/report.xpm \
		../src/icons/new.xpm \
		../src/icons/zoom-in.xpm \
		../src/icons/stop.xpm \
		../src/icons/save_all.xpm \
		../src/icons/axial.xpm \
		../src/icons/rec.xpm \
		../src/icons/cubic.xpm \
		../src/icons/open.xpm \
		../src/icons/poly.xpm \
		../src/icons/guides.xpm \
		../src/icons/coronal.xpm \
		../src/icons/atlas.xpm \
		../src/icons/delete.xpm \
		../src/icons/move.xpm \
		../src/icons/conn.xpm \
		../src/icons/ruler.xpm \
		../src/icons/zoom-out.xpm \
		../src/icons/stat.xpm
	/usr/lib/qt5/bin/rcc -name icons ../src/icons.qrc -o qrc_icons.cpp

compiler_moc_predefs_make_all: moc_predefs.h
compiler_moc_predefs_clean:
	-$(DEL_FILE) moc_predefs.h
moc_predefs.h: /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/data/dummy.cpp
	g++ -pipe -fpermissive -O2 -std=gnu++11 -Wall -W -dM -E -o moc_predefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/data/dummy.cpp

compiler_moc_header_make_all: moc_mainwindow.cpp moc_dicom_parser.cpp moc_tracking_window.cpp moc_reconstruction_window.cpp moc_slice_view_scene.cpp moc_glwidget.cpp moc_regiontablewidget.cpp moc_tracttablewidget.cpp moc_renderingtablewidget.cpp moc_qcolorcombobox.cpp moc_view_image.cpp moc_manual_alignment.cpp moc_tract_report.cpp moc_color_bar_dialog.cpp moc_connectivity_matrix_dialog.cpp moc_atlasdialog.cpp moc_filebrowser.cpp moc_qcompletelineedit.cpp moc_createdbdialog.cpp moc_individual_connectometry.cpp moc_match_db.cpp moc_db_window.cpp moc_group_connectometry.cpp moc_regtoolbox.cpp moc_nn_connectometry.cpp moc_auto_track.cpp
compiler_moc_header_clean:
	-$(DEL_FILE) moc_mainwindow.cpp moc_dicom_parser.cpp moc_tracking_window.cpp moc_reconstruction_window.cpp moc_slice_view_scene.cpp moc_glwidget.cpp moc_regiontablewidget.cpp moc_tracttablewidget.cpp moc_renderingtablewidget.cpp moc_qcolorcombobox.cpp moc_view_image.cpp moc_manual_alignment.cpp moc_tract_report.cpp moc_color_bar_dialog.cpp moc_connectivity_matrix_dialog.cpp moc_atlasdialog.cpp moc_filebrowser.cpp moc_qcompletelineedit.cpp moc_createdbdialog.cpp moc_individual_connectometry.cpp moc_match_db.cpp moc_db_window.cpp moc_group_connectometry.cpp moc_regtoolbox.cpp moc_nn_connectometry.cpp moc_auto_track.cpp
moc_mainwindow.cpp: ../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/mainwindow.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/mainwindow.h -o moc_mainwindow.cpp

moc_dicom_parser.cpp: ../src/dicom/dwi_header.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/dicom/dicom_parser.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/dicom/dicom_parser.h -o moc_dicom_parser.cpp

moc_tracking_window.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/tracking_window.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/tracking_window.h -o moc_tracking_window.cpp

moc_reconstruction_window.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/reconstruction/reconstruction_window.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/reconstruction/reconstruction_window.h -o moc_reconstruction_window.cpp

moc_slice_view_scene.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/slice_view_scene.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/slice_view_scene.h -o moc_slice_view_scene.cpp

moc_glwidget.cpp: ../src/tracking/region/RegionModel.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/opengl/glwidget.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/opengl/glwidget.h -o moc_glwidget.cpp

moc_regiontablewidget.cpp: ../src/tracking/region/Regions.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/region/regiontablewidget.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/region/regiontablewidget.h -o moc_regiontablewidget.cpp

moc_tracttablewidget.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/tract/tracttablewidget.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/tract/tracttablewidget.h -o moc_tracttablewidget.cpp

moc_renderingtablewidget.cpp: ../src/opengl/renderingtablewidget.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/opengl/renderingtablewidget.h -o moc_renderingtablewidget.cpp

moc_qcolorcombobox.cpp: ../src/qcolorcombobox.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/qcolorcombobox.h -o moc_qcolorcombobox.cpp

moc_view_image.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/view_image.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/view_image.h -o moc_view_image.cpp

moc_manual_alignment.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/manual_alignment.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/manual_alignment.h -o moc_manual_alignment.cpp

moc_tract_report.cpp: ../src/tracking/tract_report.hpp \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/tract_report.hpp -o moc_tract_report.cpp

moc_color_bar_dialog.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/color_bar_dialog.hpp \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/color_bar_dialog.hpp -o moc_color_bar_dialog.cpp

moc_connectivity_matrix_dialog.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/connectivity_matrix_dialog.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/connectivity_matrix_dialog.h -o moc_connectivity_matrix_dialog.cpp

moc_atlasdialog.cpp: ../src/tracking/atlasdialog.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/tracking/atlasdialog.h -o moc_atlasdialog.cpp

moc_filebrowser.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/filebrowser.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/filebrowser.h -o moc_filebrowser.cpp

moc_qcompletelineedit.cpp: ../src/qcompletelineedit.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/qcompletelineedit.h -o moc_qcompletelineedit.cpp

moc_createdbdialog.cpp: ../src/connectometry/createdbdialog.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/connectometry/createdbdialog.h -o moc_createdbdialog.cpp

moc_individual_connectometry.cpp: ../src/connectometry/individual_connectometry.hpp \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/connectometry/individual_connectometry.hpp -o moc_individual_connectometry.cpp

moc_match_db.cpp: ../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/match_db.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/connectometry/match_db.h -o moc_match_db.cpp

moc_db_window.cpp: ../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/db_window.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/connectometry/db_window.h -o moc_db_window.cpp

moc_group_connectometry.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/group_connectometry.hpp \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/connectometry/group_connectometry.hpp -o moc_group_connectometry.cpp

moc_regtoolbox.cpp: ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/regtoolbox.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/regtoolbox.h -o moc_regtoolbox.cpp

moc_nn_connectometry.cpp: ../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/nn_connectometry_analysis.h \
		../src/connectometry/nn_connectometry.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/connectometry/nn_connectometry.h -o moc_nn_connectometry.cpp

moc_auto_track.cpp: ../src/auto_track.h \
		moc_predefs.h \
		/usr/lib/qt5/bin/moc
	/usr/lib/qt5/bin/moc $(DEFINES) --include /tmp/dsistudio/build/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/tmp/dsistudio/src -I/tmp/dsistudio/src/plot -I/tmp/dsistudio/src/libs -I/tmp/dsistudio/src/libs/dsi -I/tmp/dsistudio/src/libs/tracking -I/tmp/dsistudio/src/libs/mapping -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtOpenGL -I/usr/include/x86_64-linux-gnu/qt5/QtCharts -I/usr/include/x86_64-linux-gnu/qt5/QtWidgets -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/include/c++/8 -I/usr/include/x86_64-linux-gnu/c++/8 -I/usr/include/c++/8/backward -I/usr/lib/gcc/x86_64-linux-gnu/8/include -I/usr/local/include -I/usr/lib/gcc/x86_64-linux-gnu/8/include-fixed -I/usr/include/x86_64-linux-gnu -I/usr/include ../src/auto_track.h -o moc_auto_track.cpp

compiler_moc_objc_header_make_all:
compiler_moc_objc_header_clean:
compiler_moc_source_make_all:
compiler_moc_source_clean:
compiler_uic_make_all: ui_mainwindow.h ui_tracking_window.h ui_reconstruction_window.h ui_dicom_parser.h ui_view_image.h ui_manual_alignment.h ui_tract_report.h ui_color_bar_dialog.h ui_connectivity_matrix_dialog.h ui_atlasdialog.h ui_filebrowser.h ui_createdbdialog.h ui_individual_connectometry.h ui_match_db.h ui_db_window.h ui_group_connectometry.h ui_regtoolbox.h ui_nn_connectometry.h ui_auto_track.h
compiler_uic_clean:
	-$(DEL_FILE) ui_mainwindow.h ui_tracking_window.h ui_reconstruction_window.h ui_dicom_parser.h ui_view_image.h ui_manual_alignment.h ui_tract_report.h ui_color_bar_dialog.h ui_connectivity_matrix_dialog.h ui_atlasdialog.h ui_filebrowser.h ui_createdbdialog.h ui_individual_connectometry.h ui_match_db.h ui_db_window.h ui_group_connectometry.h ui_regtoolbox.h ui_nn_connectometry.h ui_auto_track.h
ui_mainwindow.h: ../src/mainwindow.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/mainwindow.ui -o ui_mainwindow.h

ui_tracking_window.h: ../src/tracking/tracking_window.ui \
		/usr/lib/qt5/bin/uic \
		../src/qcolorcombobox.h
	/usr/lib/qt5/bin/uic ../src/tracking/tracking_window.ui -o ui_tracking_window.h

ui_reconstruction_window.h: ../src/reconstruction/reconstruction_window.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/reconstruction/reconstruction_window.ui -o ui_reconstruction_window.h

ui_dicom_parser.h: ../src/dicom/dicom_parser.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/dicom/dicom_parser.ui -o ui_dicom_parser.h

ui_view_image.h: ../src/view_image.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/view_image.ui -o ui_view_image.h

ui_manual_alignment.h: ../src/manual_alignment.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/manual_alignment.ui -o ui_manual_alignment.h

ui_tract_report.h: ../src/tracking/tract_report.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/tracking/tract_report.ui -o ui_tract_report.h

ui_color_bar_dialog.h: ../src/tracking/color_bar_dialog.ui \
		/usr/lib/qt5/bin/uic \
		../src/qcolorcombobox.h
	/usr/lib/qt5/bin/uic ../src/tracking/color_bar_dialog.ui -o ui_color_bar_dialog.h

ui_connectivity_matrix_dialog.h: ../src/tracking/connectivity_matrix_dialog.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/tracking/connectivity_matrix_dialog.ui -o ui_connectivity_matrix_dialog.h

ui_atlasdialog.h: ../src/tracking/atlasdialog.ui \
		/usr/lib/qt5/bin/uic \
		../src/qcompletelineedit.h
	/usr/lib/qt5/bin/uic ../src/tracking/atlasdialog.ui -o ui_atlasdialog.h

ui_filebrowser.h: ../src/filebrowser.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/filebrowser.ui -o ui_filebrowser.h

ui_createdbdialog.h: ../src/connectometry/createdbdialog.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/connectometry/createdbdialog.ui -o ui_createdbdialog.h

ui_individual_connectometry.h: ../src/connectometry/individual_connectometry.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/connectometry/individual_connectometry.ui -o ui_individual_connectometry.h

ui_match_db.h: ../src/connectometry/match_db.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/connectometry/match_db.ui -o ui_match_db.h

ui_db_window.h: ../src/connectometry/db_window.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/connectometry/db_window.ui -o ui_db_window.h

ui_group_connectometry.h: ../src/connectometry/group_connectometry.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/connectometry/group_connectometry.ui -o ui_group_connectometry.h

ui_regtoolbox.h: ../src/regtoolbox.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/regtoolbox.ui -o ui_regtoolbox.h

ui_nn_connectometry.h: ../src/connectometry/nn_connectometry.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/connectometry/nn_connectometry.ui -o ui_nn_connectometry.h

ui_auto_track.h: ../src/auto_track.ui \
		/usr/lib/qt5/bin/uic
	/usr/lib/qt5/bin/uic ../src/auto_track.ui -o ui_auto_track.h

compiler_yacc_decl_make_all:
compiler_yacc_decl_clean:
compiler_yacc_impl_make_all:
compiler_yacc_impl_clean:
compiler_lex_make_all:
compiler_lex_clean:
compiler_clean: compiler_rcc_clean compiler_moc_predefs_clean compiler_moc_header_clean compiler_uic_clean 

####### Compile

main.o: ../src/main.cpp ../src/mainwindow.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/program_option.hpp \
		../src/cmd/cnt.cpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/tracking/atlasdialog.h \
		../src/connectometry/group_connectometry.hpp \
		ui_group_connectometry.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o main.o ../src/main.cpp

mainwindow.o: ../src/mainwindow.cpp ../src/mainwindow.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_mainwindow.h \
		../src/regtoolbox.h \
		../src/filebrowser.h \
		../src/reconstruction/reconstruction_window.h \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/dicom/dicom_parser.h \
		../src/dicom/dwi_header.hpp \
		../src/view_image.h \
		../src/manual_alignment.h \
		../src/connectometry/individual_connectometry.hpp \
		../src/connectometry/createdbdialog.h \
		../src/connectometry/db_window.h \
		../src/connectometry/group_connectometry.hpp \
		../src/connectometry/nn_connectometry.h \
		../src/connectometry/nn_connectometry_analysis.h \
		../src/program_option.hpp \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/auto_track.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o mainwindow.o ../src/mainwindow.cpp

dicom_parser.o: ../src/dicom/dicom_parser.cpp ../src/dicom/dicom_parser.h \
		../src/dicom/dwi_header.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		ui_dicom_parser.h \
		../src/mainwindow.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o dicom_parser.o ../src/dicom/dicom_parser.cpp

dwi_header.o: ../src/dicom/dwi_header.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/dicom/dwi_header.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o dwi_header.o ../src/dicom/dwi_header.cpp

prog_interface.o: ../src/libs/utility/prog_interface.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o prog_interface.o ../src/libs/utility/prog_interface.cpp

dsi_interface_imp.o: ../src/libs/dsi/dsi_interface_imp.cpp ../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/dsi/odf_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/libs/dsi/dti_process.hpp \
		../src/libs/dsi/gqi_process.hpp \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/gqi_mni_reconstruction.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o dsi_interface_imp.o ../src/libs/dsi/dsi_interface_imp.cpp

interpolation_process.o: ../src/libs/tracking/interpolation_process.cpp ../src/libs/tracking/interpolation_process.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o interpolation_process.o ../src/libs/tracking/interpolation_process.cpp

tract_cluster.o: ../src/libs/tracking/tract_cluster.cpp ../src/libs/tracking/tract_cluster.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tract_cluster.o ../src/libs/tracking/tract_cluster.cpp

SliceModel.o: ../src/SliceModel.cpp ../src/SliceModel.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o SliceModel.o ../src/SliceModel.cpp

tracking_window.o: ../src/tracking/tracking_window.cpp ../src/libs/utility \
		../src/tracking/tracking_window.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_tracking_window.h \
		../src/opengl/glwidget.h \
		../src/tracking/region/RegionModel.h \
		../src/opengl/renderingtablewidget.h \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/manual_alignment.h \
		../src/tracking/tract_report.hpp \
		../src/tracking/color_bar_dialog.hpp \
		../src/tracking/connectivity_matrix_dialog.h \
		../src/tracking/atlasdialog.h \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/regtoolbox.h \
		../src/libs/dsi/tessellated_icosahedron.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tracking_window.o ../src/tracking/tracking_window.cpp

reconstruction_window.o: ../src/reconstruction/reconstruction_window.cpp ../src/reconstruction/reconstruction_window.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		ui_reconstruction_window.h \
		../src/mainwindow.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/manual_alignment.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o reconstruction_window.o ../src/reconstruction/reconstruction_window.cpp

slice_view_scene.o: ../src/tracking/slice_view_scene.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_tracking_window.h \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/opengl/glwidget.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o slice_view_scene.o ../src/tracking/slice_view_scene.cpp

glwidget.o: ../src/opengl/glwidget.cpp ../src/opengl/glwidget.h \
		../src/tracking/region/RegionModel.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_tracking_window.h \
		../src/opengl/renderingtablewidget.h \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/tracking/color_bar_dialog.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o glwidget.o ../src/opengl/glwidget.cpp

regiontablewidget.o: ../src/tracking/region/regiontablewidget.cpp ../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/qcolorcombobox.h \
		ui_tracking_window.h \
		../src/opengl/glwidget.h \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o regiontablewidget.o ../src/tracking/region/regiontablewidget.cpp

Regions.o: ../src/tracking/region/Regions.cpp ../src/tracking/region/Regions.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/SliceModel.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o Regions.o ../src/tracking/region/Regions.cpp

RegionModel.o: ../src/tracking/region/RegionModel.cpp ../src/tracking/region/RegionModel.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o RegionModel.o ../src/tracking/region/RegionModel.cpp

tract_model.o: ../src/libs/tracking/tract_model.cpp ../src/libs/tracking/roi.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tract_cluster.hpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tract_model.o ../src/libs/tracking/tract_model.cpp

tracttablewidget.o: ../src/tracking/tract/tracttablewidget.cpp ../src/tracking/tract/tracttablewidget.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/opengl/glwidget.h \
		../src/tracking/region/RegionModel.h \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		ui_tracking_window.h \
		../src/opengl/renderingtablewidget.h \
		../src/tracking/color_bar_dialog.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tracttablewidget.o ../src/tracking/tract/tracttablewidget.cpp

renderingtablewidget.o: ../src/opengl/renderingtablewidget.cpp ../src/opengl/renderingtablewidget.h \
		../src/qcolorcombobox.h \
		../src/tracking/tracking_window.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/opengl/glwidget.h \
		../src/tracking/region/RegionModel.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o renderingtablewidget.o ../src/opengl/renderingtablewidget.cpp

qcolorcombobox.o: ../src/qcolorcombobox.cpp ../src/qcolorcombobox.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o qcolorcombobox.o ../src/qcolorcombobox.cpp

trk.o: ../src/cmd/trk.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/SliceModel.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o trk.o ../src/cmd/trk.cpp

rec.o: ../src/cmd/rec.cpp ../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/reconstruction/reconstruction_window.h \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o rec.o ../src/cmd/rec.cpp

src.o: ../src/cmd/src.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/dicom/dwi_header.hpp \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o src.o ../src/cmd/src.cpp

atlas.o: ../src/libs/mapping/atlas.cpp ../src/libs/mapping/atlas.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o atlas.o ../src/libs/mapping/atlas.cpp

ana.o: ../src/cmd/ana.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o ana.o ../src/cmd/ana.cpp

view_image.o: ../src/view_image.cpp ../src/view_image.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		ui_view_image.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o view_image.o ../src/view_image.cpp

manual_alignment.o: ../src/manual_alignment.cpp ../src/manual_alignment.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_manual_alignment.h \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o manual_alignment.o ../src/manual_alignment.cpp

tract_report.o: ../src/tracking/tract_report.cpp ../src/tracking/tract_report.hpp \
		ui_tract_report.h \
		ui_tracking_window.h \
		../src/tracking/tracking_window.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tract_report.o ../src/tracking/tract_report.cpp

color_bar_dialog.o: ../src/tracking/color_bar_dialog.cpp ../src/tracking/color_bar_dialog.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		ui_color_bar_dialog.h \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/opengl/glwidget.h \
		../src/tracking/region/RegionModel.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o color_bar_dialog.o ../src/tracking/color_bar_dialog.cpp

exp.o: ../src/cmd/exp.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o exp.o ../src/cmd/exp.cpp

connectivity_matrix_dialog.o: ../src/tracking/connectivity_matrix_dialog.cpp ../src/tracking/connectivity_matrix_dialog.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_connectivity_matrix_dialog.h \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/tracking/region/RegionModel.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/connectometry/group_connectometry_analysis.h \
		ui_tracking_window.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o connectivity_matrix_dialog.o ../src/tracking/connectivity_matrix_dialog.cpp

tessellated_icosahedron.o: ../src/libs/dsi/tessellated_icosahedron.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tessellated_icosahedron.o ../src/libs/dsi/tessellated_icosahedron.cpp

atl.o: ../src/cmd/atl.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/mapping/atlas.hpp \
		../src/program_option.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o atl.o ../src/cmd/atl.cpp

atlasdialog.o: ../src/tracking/atlasdialog.cpp ../src/tracking/atlasdialog.h \
		ui_atlasdialog.h \
		../src/tracking/region/regiontablewidget.h \
		../src/tracking/region/Regions.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o atlasdialog.o ../src/tracking/atlasdialog.cpp

vis.o: ../src/cmd/vis.cpp ../src/libs/tracking/tract_model.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/opengl/glwidget.h \
		../src/tracking/region/RegionModel.h \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o vis.o ../src/cmd/vis.cpp

filebrowser.o: ../src/filebrowser.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/filebrowser.h \
		ui_filebrowser.h \
		../src/dicom/dicom_parser.h \
		../src/dicom/dwi_header.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o filebrowser.o ../src/filebrowser.cpp

qcompletelineedit.o: ../src/qcompletelineedit.cpp ../src/qcompletelineedit.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o qcompletelineedit.o ../src/qcompletelineedit.cpp

fib_data.o: ../src/libs/tracking/fib_data.cpp ../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o fib_data.o ../src/libs/tracking/fib_data.cpp

tracking_thread.o: ../src/libs/tracking/tracking_thread.cpp ../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o tracking_thread.o ../src/libs/tracking/tracking_thread.cpp

ren.o: ../src/cmd/ren.cpp ../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o ren.o ../src/cmd/ren.cpp

connectometry_db.o: ../src/libs/mapping/connectometry_db.cpp ../src/libs/mapping/connectometry_db.hpp \
		../src/libs/gzip_interface.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o connectometry_db.o ../src/libs/mapping/connectometry_db.cpp

createdbdialog.o: ../src/connectometry/createdbdialog.cpp ../src/connectometry/createdbdialog.h \
		ui_createdbdialog.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/dsi/image_model.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o createdbdialog.o ../src/connectometry/createdbdialog.cpp

individual_connectometry.o: ../src/connectometry/individual_connectometry.cpp ui_tracking_window.h \
		../src/connectometry/individual_connectometry.hpp \
		ui_individual_connectometry.h \
		../src/tracking/tracking_window.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/SliceModel.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o individual_connectometry.o ../src/connectometry/individual_connectometry.cpp

match_db.o: ../src/connectometry/match_db.cpp ../src/connectometry/match_db.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_match_db.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o match_db.o ../src/connectometry/match_db.cpp

db_window.o: ../src/connectometry/db_window.cpp ../src/connectometry/db_window.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		ui_db_window.h \
		../src/connectometry/match_db.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o db_window.o ../src/connectometry/db_window.cpp

group_connectometry.o: ../src/connectometry/group_connectometry.cpp ../src/tracking/region/Regions.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/tracking/region/RegionModel.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/group_connectometry.hpp \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		ui_group_connectometry.h \
		ui_tracking_window.h \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h \
		../src/tracking/atlasdialog.h \
		../src/libs/tracking/roi.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o group_connectometry.o ../src/connectometry/group_connectometry.cpp

group_connectometry_analysis.o: ../src/connectometry/group_connectometry_analysis.cpp ../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/tracking/tracking_window.h \
		../src/SliceModel.h \
		../src/tracking/slice_view_scene.h \
		../src/tracking/tract/tracttablewidget.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o group_connectometry_analysis.o ../src/connectometry/group_connectometry_analysis.cpp

regtoolbox.o: ../src/regtoolbox.cpp ../src/regtoolbox.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		ui_regtoolbox.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o regtoolbox.o ../src/regtoolbox.cpp

cnn.o: ../src/cmd/cnn.cpp ../src/program_option.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o cnn.o ../src/cmd/cnn.cpp

qc.o: ../src/cmd/qc.cpp ../src/program_option.hpp \
		../src/libs/dsi/image_model.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o qc.o ../src/cmd/qc.cpp

basic_voxel.o: ../src/libs/dsi/basic_voxel.cpp ../src/libs/dsi/basic_voxel.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/dsi/image_model.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o basic_voxel.o ../src/libs/dsi/basic_voxel.cpp

image_model.o: ../src/libs/dsi/image_model.cpp ../src/libs/dsi/image_model.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/dsi/odf_process.hpp \
		../src/libs/tracking/basic_process.hpp \
		../src/libs/dsi/dti_process.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o image_model.o ../src/libs/dsi/image_model.cpp

nn_connectometry.o: ../src/connectometry/nn_connectometry.cpp ../src/connectometry/nn_connectometry.h \
		../src/connectometry/group_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/connectometry/nn_connectometry_analysis.h \
		ui_nn_connectometry.h
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o nn_connectometry.o ../src/connectometry/nn_connectometry.cpp

nn_connectometry_analysis.o: ../src/connectometry/nn_connectometry_analysis.cpp ../src/connectometry/nn_connectometry_analysis.h \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/gzip_interface.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o nn_connectometry_analysis.o ../src/connectometry/nn_connectometry_analysis.cpp

reg.o: ../src/cmd/reg.cpp ../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/program_option.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o reg.o ../src/cmd/reg.cpp

auto_track.o: ../src/auto_track.cpp ../src/auto_track.h \
		ui_auto_track.h \
		../src/libs/dsi/image_model.hpp \
		../src/tipl/tipl.hpp \
		../src/tipl/utility/basic_image.hpp \
		../src/tipl/utility/geometry.hpp \
		../src/tipl/utility/pixel_value.hpp \
		../src/tipl/utility/pixel_index.hpp \
		../src/tipl/morphology/morphology.hpp \
		../src/tipl/numerical/basic_op.hpp \
		../src/tipl/utility/multi_thread.hpp \
		../src/tipl/numerical/index_algorithm.hpp \
		../src/tipl/numerical/window.hpp \
		../src/tipl/segmentation/segmentation.hpp \
		../src/tipl/segmentation/otsu.hpp \
		../src/tipl/numerical/numerical.hpp \
		../src/tipl/numerical/interpolation.hpp \
		../src/tipl/segmentation/watershed.hpp \
		../src/tipl/io/bitmap.hpp \
		../src/tipl/segmentation/graph_cut.hpp \
		../src/tipl/segmentation/disjoint_set.hpp \
		../src/tipl/segmentation/fast_marching.hpp \
		../src/tipl/segmentation/stochastic_competition.hpp \
		../src/tipl/numerical/transformation.hpp \
		../src/tipl/numerical/matrix.hpp \
		../src/tipl/numerical/resampling.hpp \
		../src/tipl/numerical/statistics.hpp \
		../src/libs/utility \
		../src/tipl/numerical/slice.hpp \
		../src/tipl/numerical/fft.hpp \
		../src/tipl/numerical/optimization.hpp \
		../src/tipl/numerical/dif.hpp \
		../src/tipl/io/io.hpp \
		../src/tipl/io/nifti.hpp \
		../src/tipl/io/interface.hpp \
		../src/tipl/io/dicom.hpp \
		../src/tipl/io/mat.hpp \
		../src/tipl/io/2dseq.hpp \
		../src/tipl/io/avi.hpp \
		../src/tipl/filter/filter_model.hpp \
		../src/tipl/filter/anisotropic_diffusion.hpp \
		../src/tipl/filter/gaussian.hpp \
		../src/tipl/filter/mean.hpp \
		../src/tipl/filter/sobel.hpp \
		../src/tipl/filter/canny_edge.hpp \
		../src/tipl/filter/gradient_magnitude.hpp \
		../src/tipl/reg/linear.hpp \
		../src/tipl/reg/lddmm.hpp \
		../src/tipl/reg/cdm.hpp \
		../src/tipl/reg/bfnorm.hpp \
		../src/tipl/ml/utility.hpp \
		../src/tipl/ml/nb.hpp \
		../src/tipl/ml/lg.hpp \
		../src/tipl/ml/non_parametric.hpp \
		../src/tipl/ml/ada_boost.hpp \
		../src/tipl/ml/decision_tree.hpp \
		../src/tipl/ml/k_means.hpp \
		../src/tipl/ml/em.hpp \
		../src/tipl/ml/hmc.hpp \
		../src/tipl/ml/svm.hpp \
		../src/tipl/ml/cnn.hpp \
		../src/tipl/vis/march_cube.hpp \
		../src/tipl/vis/color_map.hpp \
		../src/libs/dsi/basic_voxel.hpp \
		../src/libs/dsi/tessellated_icosahedron.hpp \
		../src/libs/gzip_interface.hpp \
		../src/libs/prog_interface_static_link.h \
		../src/libs/tracking/fib_data.hpp \
		../src/libs/mapping/connectometry_db.hpp \
		../src/libs/mapping/atlas.hpp \
		../src/libs/tracking/tracking_thread.hpp \
		../src/libs/tracking/roi.hpp \
		../src/libs/tracking/tract_model.hpp \
		../src/libs/tracking/tracking_method.hpp \
		../src/libs/tracking/interpolation_process.hpp \
		../src/libs/tracking/basic_process.hpp
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o auto_track.o ../src/auto_track.cpp

qrc_icons.o: qrc_icons.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o qrc_icons.o qrc_icons.cpp

moc_mainwindow.o: moc_mainwindow.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_mainwindow.o moc_mainwindow.cpp

moc_dicom_parser.o: moc_dicom_parser.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_dicom_parser.o moc_dicom_parser.cpp

moc_tracking_window.o: moc_tracking_window.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_tracking_window.o moc_tracking_window.cpp

moc_reconstruction_window.o: moc_reconstruction_window.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_reconstruction_window.o moc_reconstruction_window.cpp

moc_slice_view_scene.o: moc_slice_view_scene.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_slice_view_scene.o moc_slice_view_scene.cpp

moc_glwidget.o: moc_glwidget.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_glwidget.o moc_glwidget.cpp

moc_regiontablewidget.o: moc_regiontablewidget.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_regiontablewidget.o moc_regiontablewidget.cpp

moc_tracttablewidget.o: moc_tracttablewidget.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_tracttablewidget.o moc_tracttablewidget.cpp

moc_renderingtablewidget.o: moc_renderingtablewidget.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_renderingtablewidget.o moc_renderingtablewidget.cpp

moc_qcolorcombobox.o: moc_qcolorcombobox.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_qcolorcombobox.o moc_qcolorcombobox.cpp

moc_view_image.o: moc_view_image.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_view_image.o moc_view_image.cpp

moc_manual_alignment.o: moc_manual_alignment.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_manual_alignment.o moc_manual_alignment.cpp

moc_tract_report.o: moc_tract_report.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_tract_report.o moc_tract_report.cpp

moc_color_bar_dialog.o: moc_color_bar_dialog.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_color_bar_dialog.o moc_color_bar_dialog.cpp

moc_connectivity_matrix_dialog.o: moc_connectivity_matrix_dialog.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_connectivity_matrix_dialog.o moc_connectivity_matrix_dialog.cpp

moc_atlasdialog.o: moc_atlasdialog.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_atlasdialog.o moc_atlasdialog.cpp

moc_filebrowser.o: moc_filebrowser.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_filebrowser.o moc_filebrowser.cpp

moc_qcompletelineedit.o: moc_qcompletelineedit.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_qcompletelineedit.o moc_qcompletelineedit.cpp

moc_createdbdialog.o: moc_createdbdialog.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_createdbdialog.o moc_createdbdialog.cpp

moc_individual_connectometry.o: moc_individual_connectometry.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_individual_connectometry.o moc_individual_connectometry.cpp

moc_match_db.o: moc_match_db.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_match_db.o moc_match_db.cpp

moc_db_window.o: moc_db_window.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_db_window.o moc_db_window.cpp

moc_group_connectometry.o: moc_group_connectometry.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_group_connectometry.o moc_group_connectometry.cpp

moc_regtoolbox.o: moc_regtoolbox.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_regtoolbox.o moc_regtoolbox.cpp

moc_nn_connectometry.o: moc_nn_connectometry.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_nn_connectometry.o moc_nn_connectometry.cpp

moc_auto_track.o: moc_auto_track.cpp 
	$(CXX) -c $(CXXFLAGS) $(INCPATH) -o moc_auto_track.o moc_auto_track.cpp

####### Install

install:  FORCE

uninstall:  FORCE

FORCE:

