Dear All,
I am pleased to announce that the next official SPM course covering
fMRI/MRI/VBM will take place in London: *Thursday 14^th May to Saturday
16^th May 2015.*
The course is organised by the Methods Group at the Wellcome Trust
Centre for Neuroimaging ("the FIL"), where SPM is developed. The
three-day course will be divided into theoretical sessions covering
experimental design and statistical inference and practical sessions in
which SPM12 will be used to analyse exemplar data sets. This course is
suitable for both beginners and more advanced users, with topics
including image pre-processing, the general linear model (GLM),
voxel-based morphometry (VBM) and Dynamic Causal Modelling (DCM). The
course is held directly after the SPM for MEG/EEG course, which will be
11^th -13^th May at the same venue.
*Registration opens 9^th March*and places are strictly limited. If you
would like an email reminder when registration opens, please add your
email address here - https://spmcourses.typeform.com/to/W3VGTK .
The programme for the course is below.
Best,
Peter.
Peter Zeidman, PhD
Methods Group
Wellcome Trust Centre for Neuroimaging
12 Queen Square
London WC1N 3BG
peter.zeidman(a)ucl.ac.uk <mailto:peter.zeidman@ucl.ac.uk>
*Programme (provisional):*
*Thursday 14^th May*
**
08:45 -- 09:15
Registration and Coffee
09:15 -- 09:30
Introduction to the Course
09:30 -- 10:00
Overview of SPM
10:00 -- 10:30
Pre-processing for fMRI -- Theory
10:30 -- 11:00
Pre-processing for fMRI -- Demo
/Coffee/
11:30 -- 12:00
The General Linear Model
12:00 -- 12:45
Contrasts and Classical Inference
/Lunch/
13:45 -- 14:15
Group Analysis
14:15 -- 15:00
Random Field Theory & Alternatives
/Tea/
15:30 -- 16:15
Segmentation and VBM -- Theory
16:15 -- 17:00
Segmentation and VBM -- Demo
17:00 -- 18:00
"Questions and Answers" Clinic
**
*Friday 15^th May*
**
09:30 -- 10:15
Experimental Design
10:15 -- 11:00
Event-related fMRI -- Theory
/Coffee/
11:30 -- 12:15
Event-related fMRI -- Demo
12:15 -- 13:00
Bayesian Inference
/Lunch/
14:00 -- 15:00
Dynamic Causal Modelling for fMRI
/Tea/
15:30 -- 16:30
DCM for fMRI -- Advanced Topics
16:30 -- 17:15
DCM for fMRI -- Demo
17:15 -- 18:00
"Questions and Answers" Clinic
/18:30 --/
/Social Event/
//
*Saturday 16^th May*
*PRACTICAL WORKSHOPS*
9:30 -- 10:00
Introduction; Allocation of Groups
10:00 -- 15:30
Parallel session in small groups covering: fMRI analyses (several groups
depending on attendees' level of knowledge), Voxel-Based Morphometry
(VBM) and Dynamic causal modelling (DCM).
/Coffee /
16:00 -- 17:00
Workshop feedback presentations
Dear all,
Due to unforeseen circumstances tomorrow's seminar has been cancelled.
Best wishes,
Jill
--
Jill Hurst
PA to Gary Green MA DPhil BM BCh FRSA FSB
Director - York Neuroimaging Centre
Professor of Neuroimaging and Human Neuroscience
Telephone: 01904 43 5329
Fax: 01904 43 5356
Researcher position (PhD student / Post-Doc level):
The Centre for Early Psychosis Studies (Head: Dr. Nikolaos Koutsouleris) at the Ludwig-Maximilians-University of Munich, Department of Psychiatry and Psychotherapy (Chair: Prof. Dr. Peter Falkai), under the EUFP-7 project PRONIA (http://www.pronia.eu), seeks an outstanding individual for the development of multivariate biomarkers of major psychiatric diseases, including schizophrenic and affective psychoses, borderline personality and anxiety disorders. The project's aim is to construct reliable diagnostic and predictive methods that integrate neuroimaging, neurocognitive, genetic, metabolomic and clinical biomarkers using state-of-the-art machine learning techniques. The salary is according the German TV-L E13 and depends on academic level of the applicant. The position is initially limited to one year, with the possibility to further extend it for another two years.
Application Criteria:
The candidate should be experienced in MATLAB programming and should be familiar with current neuroimaging processing techniques (e.g. VBM, cortex reconstruction) and software packages (SPM, FSL, Freesurfer). These skills are needed to further develop and extend in-house machine-learning techniques, including unsupervised and semi-supervised clustering techniques vector-machines and ensemble learning methods. An important focus of the work will be the analysis of genetic data acquired within PsyCourse (http://www.psycourse.de/) using the aforementioned techniques.
The successful candidate will work in the coordinating centre of a multi-centre EU Project's with a young, dynamic and multidisciplinary team. The main roles associated with this position are not restricted to scientific output, they include software production and project coordination as well. Henceforth the candidate should have a flexible and structured profile complemented by a good strategic thinking ability.
Long-standing cooperations exist with the Structural Brain Mapping Group at the University of Jena (Prof. Christian Gaser) and the Section for Biomedical Image Analysis (Prof. Christos Davatzikos).
Please send your application including a CV and a letter of recommendation to Dr. Nikolaos Koutsouleris, Department of Psychiatry and Psychotherapy, Nußbaumstr. 7, 80336 Munich, Germany or by email to nikolaos.koutsouleris(a)med.uni-muenchen.de. For further information concerning this position and our research group, please do not hesitate to contact Dr. Nikolaos Koutsouleris and Carlos Cabral (carlos.cabral(a)med.uni-muenchen.de).
Review of applications will begin immediately and continue until the position is filled. The start date is as soon as possible.
Looking for an exciting opportunity in a research facility
specialising in multi-disciplinary research in Preventive Healthcare?
The PERFORM centre at Concordia University in Montreal Canada is
looking for a Research Associate specialised in Magnetic Resonance.
This is an excellent opportunity for someone interested in learning
the latest MR techniques and to contribute to the creation of a
forward looking research environment in collaboration with the
researchers of the PERFORM Centre.
More information on the job is at this site:
http://www.concordia.ca/research/perform/research/awards.html
Do not hesitate to contact DivyaSequeira at
divya.sequeira(a)concordia.ca with any questions.
To find out more about the PERFORM centre and research at PERFORM,
visit our website http://www.concordia.ca/research/perform.html
Dear all,
Open positions @ Brainntome Center.
http://brainnetome.org/en/recruitment.html
*Job 1: PhD Positions in Neuroimaging and Neuroscience, Beijing, China
Brainnetome Center*
*Applications Deadline: March 15 , 2015. *
*Brainnetome Center*
Brainnetome Center ( www.brainnetome.org <http://www.brainnetome.org/>)
at Institute of Automation of the Chinese Academy of Sciences (CASIA) is
one part of CAS Center for Excellence in Brain Science. Researchers at
the Brainnetome Center work on a wide topics in neuroimaging and
brainnetome, such as, neuroimaging, brain networks, new neurotechnique
development, simulating and modelling, and their applications in
neurological and psychiatric diseases, to discover the molecular,
cellular, and brain network mechanisms that underlie the ability of the
brain to function.
Neuroscience is entering an era of accelerated discovery driven by the
application of new molecular, genetic and imaging technologies, which
will provide a deeper understanding of the regulation and function of
the nervous system. Significant advances in determining the molecular
regulation of nerve cell function and development will have a major
impact on our understanding of more complex areas such as behaviour,
cognition, ageing, neurological disease and mental illness. The
researchers of Brainnetome Center is to promote excellence in
neuroscience by fostering the exchange of ideas, establishing new
collaborations and augmenting partnerships that already exist within the
wider Chinese brain science and information technology communities.
*The role*
Convergent evidence has shown that most psychiatric disorders are
associated with faulty brain networks. In order to understand how the
brain works and the pathophysiological mechanism of psychiatric
disorders, it is necessary to integrate the multi-level network features
obtained with various functional and anatomical brain imaging
technologies on different scales. We have proposed a new concept of
"Brainnetome" to represent such integration framework. Our Center here
closely collaborates with researchers at Queensland Brain Institute of
University of Queensland in Australia, INSERM Lyon in France, and
Research Center Juelich in Germany to study basic theory, methodologies,
algorithms and platform of the Brainnetome at multiple scales, and their
applications in neurological and psychiatric diseases. It envisions that
the brainnetome will become an emerging co-frontier of brain imaging,
information technology, neurology and psychiatry. Some long-standing
issues in neuropsychiatry may be solved by combining Brainnetome with
genome.
Several PhD positions are available at Brainnetome Center of CASIA to
utilise neuroimaging technologies to discover mechanisms of brain
networks. These positions will be supported by CAS-TWAS President's
Fellowship Programme for PhD Candidates
(http://twas.org/opportunity/cas-twas-presidents-phd-fellowship-programme).
They involve developing neuroimage analysis methods and tools and
applying them to neuroscience and clinical problems. In this role the
students will develop skills in developing computational algorithms and
computer programming in neuroimage analysis that could be utilised in
both basic research and clinical areas.
*The person*
Applicants should meet the requirements of "CAS-TWAS President's
Fellowship Programme for PhD Candidates" and have MSc degree in one of
the following fields: neuroimaging, neuroscience, neurobiology,
psychology, cognitive neuroscience, psychiatry, neurology, computer
science, electronic engineering, mathematics, and physics. Outstanding
C/C++ programming skills in Linux are highly desired.
*Enquiries*
Please first read the Application Guide
<http://brainnetome.org/images/job/Application%20Guide.doc> for your
eligibility and then contact Professor Tianzi Jiang at
jiangtz(a)nlpr.ia.ac.cn <mailto:jiangtz@nlpr.ia.ac.cn>. In order to
complete the formal application process, please find an Application
Package <http://brainnetome.org/images/job/APPLICATION_PACKAGE.zip>.
Applications Deadline: March 15 , 2015.
*Further Information*
Application Guide at
http://www.brainnetome.org/images/job/Application%20Guide.doc
<http://brainnetome.org/images/job/Application%20Guide.doc>
Application Package at
http://www.brainnetome.org/images/job/APPLICATION_PACKAGE.zip
<http://brainnetome.org/images/job/APPLICATION_PACKAGE.zip>
*Applications Deadline: March 15 , 2015.
*
*Job 2: Postdoctoral Fellow in Imaging Genetics at Queensland Brain
Institute*
The Neuroimaging and Brainnetome Laboratory of Queensland Brain
Institute (QBI) and Centre for Advanced Imaging (CAI) at the University
of Queensland, Australia, solicits applications for postdoctoral fellow
positions in imaging genetics of the human and mice. We are looking for
an excellent and highly motivated candidate with a PhD degree in
neurobiology, genetics, experimental psychology, and neuroimaging or
comparable background. Interest and/or previous experience in/with
neuroscience, animal MRI, design and image analysis as well as wet lab
experience are a plus. The successful candidate will participate in the
multidisciplinary project involves developing transgenic mice model of
psychiatric and neurological diseases. The main focus of this project is
to address how risky genes of schizophrenia and Alzheimer’s disease
affect brain networks in the human and mice. The postdoctoral fellows will
be jointly supervised by Professor Tianzi Jiang and other Professors
(QBI) who are experts in neuroscience. As at 30 June 2014, an applicant
must not have had more than five years full-time equivalent professional
research experience since the award of a PhD. The current salary range
for the award is on a four-level scale from A$71,528.60 – A$79,708.50
per annum. Commencing salaries are based strictly on the number of full
years’ experience since receiving a doctorate. Salary scales are
reviewed from time to time.
Please contact Professor Tianzi Jiang on tianzi.jiang(a)uq.edu.au
<mailto:tianzi.jiang@uq.edu.au> for research plan. To submit an
application for these positions, please refer to
http://www.uq.edu.au/research/research-management/uq-postdoctoral-research-….
Thank you and very best
Yours
Yong Liu
www.brainnetome.org/yongliu <http://www.brainnetome.org/yongliu>
-------- Forwarded Message --------
Subject: PhD studentship available
Date: Wed, 4 Feb 2015 11:06:16 +0000
From: Steel, Karen <karen.steel(a)KCL.AC.UK>
Reply-To: Steel, Karen <karen.steel(a)KCL.AC.UK>
To: EAR-MAIL(a)JISCMAIL.AC.UK
*PhD Studentship to study the role of peroxisome defects in hearing
impairment, at the Wolfson Centre for Age-Related Diseases, Guy’s
Campus, King’s College London*
*Applications are invited for a PhD studentship funded by an award from
Action on Hearing Loss, starting in October 2015. *
**
Applicants should have (or be expected to obtain) a 2:1 or 1st class
honours degree (or overseas equivalent) in a subject relevant to the
proposed project, and should be able to communicate well in English.
The studentship covers course fees (Home/EU rate), a stipend starting at
£17,000 rising each year for three years in total, and a small
contribution towards research costs, training and conference
attendance. Course fees are available only up to the UK/EU rate, so
will not cover the fees level for students outside the EU. Applicants
should send a full CV, covering letter explaining why you are applying
for this studentship, and contact details of at least two academic
referees to Ms Brenda Williams at brenda.williams(a)kcl.ac.uk
<mailto:brenda.williams@kcl.ac.uk>by the closing date: *24^th February
2015*. Interviews will be held during the week beginning 9^th March 2015.**
**
*For further details of the group’s research, see
*http://www.kcl.ac.uk/ioppn/depts/wolfson/about/people/staff/steelkaren.aspx**
*or contact Professor Karen P Steel at *karen.steel(a)kcl.ac.uk
<mailto:karen.steel@kcl.ac.uk>*. A summary of the project is given below.*
**
Pex3 protein is required for peroxisome genesis and degradation, and
peroxisomes in turn are needed for metabolic processing of very long
chain fatty acids. /PEX3/ mutations in humans are known to cause severe
diseases that include hearing impairment, but we know nothing about the
pathological basis of this. This project involves analysing a new mouse
mutation of /Pex3/ that has been found by a large-scale screen to show
high frequency hearing impairment. The student will investigate if the
hearing loss is progressive, what underlying pathological processes
occur in the auditory system, and how peroxisomes and lipids are
affected in the mutant. The mutant allele will be manipulated using Flp
and Cre recombinases to establish whether deafness results from a local
(inner ear) effect or a systemic effect of a lack of Pex3 activity, and
to ask if adult onset of reduced Pex3 activity also leads to hearing
impairment. These experiments will guide future development of
therapies for mild peroxisome defects, which may underlie some forms of
progressive hearing loss due to mild genetic variants or due to
environmental challenges.
Professor Karen P Steel, FMedSci, FRS
Wolfson Centre for Age-Related Diseases,
King's College London, Guy's Campus,
London SE1 1UL
+44 207 848 6203
karen.steel(a)kcl.ac.uk
Researcher position (PhD student / Post-Doc level):
The Centre for Early Psychosis Studies (Head: Dr. Nikolaos Koutsouleris)
at the Ludwig-Maximilians-University of Munich, Department of Psychiatry
and Psychotherapy (Chair: Prof. Dr. Peter Falkai), under the EUFP-7
project PRONIA (http://www.pronia.eu), seeks an outstanding individual
for the development of multivariate biomarkers of major psychiatric
diseases, including schizophrenic and affective psychoses, borderline
personality and anxiety disorders. The project's aim is to construct
reliable diagnostic and predictive methods that integrate neuroimaging,
neurocognitive, genetic, metabolomic and clinical biomarkers using
state-of-the-art machine learning techniques. The salary is according
the German TV-L E13 and depends on academic level of the applicant. The
position is initially limited to one year, with the possibility to
further extend it for another two years.
Application Criteria:
The candidate should be experienced in MATLAB programming and should be
familiar with current neuroimaging processing techniques (e.g. VBM,
cortex reconstruction) and software packages (SPM, FSL, Freesurfer).
These skills are needed to further develop and extend in-house
machine-learning techniques, including unsupervised and semi-supervised
clustering techniques vector-machines and ensemble learning methods. An
important focus of the work will be the analysis of genetic data
acquired within PsyCourse (http://www.psycourse.de/) using the
aforementioned techniques.
The successful candidate will work in the coordinating centre of a
multi-centre EU Project's with a young, dynamic and multidisciplinary
team. The main roles associated with this position are not restricted to
scientific output, they include software production and project
coordination as well. Henceforth the candidate should have a flexible
and structured profile complemented by a good strategic thinking ability.
Long-standing cooperations exist with the Structural Brain Mapping Group
at the University of Jena (Prof. Christian Gaser) and the Section for
Biomedical Image Analysis (Prof. Christos Davatzikos).
Please send your application including a CV and a letter of
recommendation to Dr. Nikolaos Koutsouleris, Department of Psychiatry
and Psychotherapy, Nußbaumstr. 7, 80336 Munich, Germany or by email to
nikolaos.koutsouleris(a)med.uni-muenchen.de. For further information
concerning this position and our research group, please do not hesitate
to contact Dr. Nikolaos Koutsouleris and Carlos Cabral
(carlos.cabral(a)med.uni-muenchen.de).
Review of applications will begin immediately and continue until the
position is filled. The start date is as soon as possible.
Could you please circulate the following Nervous System and Its Disorders Grand Challenge Talk hosted by the School of Psychology at the University of Leeds on February 25, 2015.
Thank you in advance.
All the best,
Katerina
___________________________________________________________________________________________________________________________________________
The Nervous System and Its Disorders Grand Challenge Talk, School of Psychology
Date: Wednesday February 25, 2015
Time: 3-4pm
Venue: Electrical Engineering Agilent LT (1.52)
Speaker: Dr Andrew Holmes
Chief, Laboratory of Behavioral & Genomic Neuroscience
National Institute of Alcohol Abuse and Alcoholism
National Institutes of Health, Bethesda, MD, USA
Title: The Traumatized Brain: how modern neuroscience is identifying causes and cures for anxiety
Focus: Anxiety disorders such as posttraumatic stress disorder are now the most common of all psychiatric conditions, but remain poorly understood and inadequately treated. Revolutionary advances in modern neuroscience are revealing key pathological brain mechanisms associated with persistent anxiety, and illuminating a path towards effective new therapeutic approaches.
BioSketch: Andy did his PhD with John Rodgers at Leeds 1995-1998, following which he obtained a PostDoc Fellowship with Jacky Crawley at NIH in Bethesda. In 2004, he was appointed Section Chief with the National Institute of Alcohol Abuse and Alcoholism (NIAAA) and, in 2011, became Chief of the Laboratory of Behavioral and Genomic Research at NIAAA. Andy has lectured the world over, and has received numerous awards and honours for his contributions to neuroscience. At the time of writing, he has published c. 150 research and/or review articles in high impact journals and has a Google Scholar h index of 56 with over 10,500 citations to his work. He is Editor-in-Chief for Genes, Brain and Behavior, serves on the Editorial Boards of Addiction Biology and Acta Neuropsychologia, and is an Associate/Advisory/Review Editor for at least half-a-dozen other major journals. Andy regularly reviews for major research funding agencies in North America and Europe, and has served as ad hoc reviewer for more than 80 scientific journals.
_____________________________________________________________________________________________________________________________________________
-------------------------------------------------------------------------------------------
Dr. Ekaterini Klepousniotou
Lecturer in Cognitive Neuroscience & Neuropsychology
School of Psychology
University of Leeds
Leeds LS2 9JT
UK
Tel: +44 (0)113 3435716
Fax: +44 (0)113 3435749
The Neuroimaging Research Core at the Marcus Autism Center in the
Department of Pediatrics at Emory University, in collaboration with the
Biomedical Imaging Technology Center in the Department of Biomedical
Engineering at Emory University/Georgia Tech, is offering a full time
position as Postdoctoral Research Fellow.
Applicants should have a Ph.D. degree in Biomedical Engineering, MR
physics, Computer Sciences, Neuroscience, Psychology or related fields,
as well as research experience in MRI image and brain network analyses.
Experience with MRI analysis software packages (i.e., FSL, AFNI for
diffusion and functional MRI data analyses) and strong computer
programming skills (MATLAB, C/C++ & Bash scripts) are required.
The Neuroimaging Research Core at Marcus is currently conducting several
large-scale longitudinal infant and school-aged neuroimaging studies.
The Core has a strong interest in developmental brain changes in very
young infants (0 to 6 months) and in young children. The goal of these
studies is to understand how autism spectrum disorders (ASD) impact the
development of brain and behavior.
The applicant will be expected to (i) develop computational and
statistics methods to analyze neuroimaging data from infants and
school-aged children (in both cross-sectional and longitudinal data
sets), (ii) design and implement novel techniques for optimizing data
collection from infants and children, (iii) prepare manuscripts and
extramural grants, and (iv) collaborate with MRI physicists, social
neuroscientists, engineers, and clinicians. The position-holder will be
expected to work closely with the Biomedical Imaging Technology Center
(directed by Dr. Xiaoping Hu) and the Social Neuroscience Lab (directed
by Dr. Warren Jones) at the Marcus Autism Center.
The Biomedical Imaging Technology Center is a research center of the
Wallace H. Coulter Department of Biomedical Engineering, a joint
department of Georgia Tech and Emory University specializing in
functional brain imaging, high-field imaging, in vivo spectroscopy, and
molecular imaging. The Marcus Autism Center is a not-for-profit
organization dedicated to the diagnosis and treatment of children with
Autism Spectrum Disorders (ASD). It is the country’s largest center for
clinical care of children and adolescents with ASD, with more than 5,000
unique children and their families served each year. The Center is
also one of the national hubs of science in the field of developmental
disabilities, designated by NIH as an Autism Center of Excellence.
Programs range from social and behavioral neuroscience, to molecular
genetics and model systems, to the augmentation of community resources
and community-viable treatments.
The position is available immediately and the initial appointment is for
one year. Renewal is expected if progress is satisfactory. Emory
University School of Medicine offers competitive benefits and salary
package in line with NIH guidelines and has been ranked high as one of
the “Best Places to Work for Postdocs”. Interested candidates should
email to Dr. Longchuan Li (lli36(a)emory.edu <mailto:lli36@emory.edu>,
please include the word “POSTDOC” in the subject of the email), with a
cover letter and CV. Qualified candidates will be asked to have 3
letters of reference forwarded to Dr. Li.
*Related publications:*
Jones, W., and A. Klin. "Attention to eyes is present but in decline in
2-6-month-old infants later diagnosed with autism." /Nature/ 504.7480
(2013): 427-431.
Shultz, Sarah, Ami Klin, and Warren Jones. "Inhibition of eye blinking
reveals subjective perceptions of stimulus salience." /Proceedings of
the National Academy of Sciences/ 108.52 (2011): 21270-21275.
Li, Longchuan, et al. "Mapping putative hubs in human, chimpanzee and
rhesus macaque connectomes via diffusion tractography." /Neuroimage/ 80
(2013): 462-474.
Li, Longchuan, et al. "The effects of connection reconstruction method
on the interregional connectivity of brain networks via diffusion
tractography." /Human brain mapping/ 33.8 (2012): 1894-1913.
Craddock, R. Cameron, et al. "Disease state prediction from resting
state functional connectivity." /Magnetic resonance in Medicine/ 62.6
(2009): 1619-1628.