ynic-users October 2015

ynic-users@ynic.york.ac.uk

9 participants
18 discussions

YNiC talk today at 4pm
by Junior Whiteley 28 Apr '16

28 Apr '16

Dear Users, Today at 4pm (in B020, Psychology), Richard Vernon will give a project presentation on: "Exploring intermediate shape representations in the Lateral Occipital Cortex" Everyone is welcome to attend. Refreshments will be served in reception afterwards. Best wishes, Junior -- Junior Whiteley York Neuroimaging Centre junior.whiteley(a)ynic.york.ac.uk

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YNiC Science Committee meeting date
by Sarah Finch 19 Nov '15

19 Nov '15

*Sent on behalf of Jonny Smallwood* The date for the next YNiC Science Committee meeting is Thursday 26th November at 10am and will be held in B101. YNiC users are welcome to come along to this meeting to ask questions and make suggestions about the running of YNiC. If you wish to raise something, please drop me a line (j <mailto:beth.jefferies@york.ac.uk>onny.smallwood(a)york.ac.uk <mailto:onny.smallwood@york.ac.uk>) before the meeting so that I can add it to the agenda. If you are unable to come along but you want to raise a point for discussion, that is fine too - just get in touch. Many thanks Sarah -- Sarah Finch | PA to Gary Green, Director York Neuroimaging Centre | The Biocentre | York Science Park | Heslington | York | YO10 5NY 01904 435329 Working hours are Tues 8.15 -14.45, Weds 8.15-17.15, Thurs 9.30-17.30 and Fri 8.15-14.45

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TMS Lab
by Andre Gouws 30 Oct '15

30 Oct '15

As requested, there is now 'Busy - Free' slider sign on the door to the TMS lab to indicate when the room is in use. Hopefully this will reduce walk-ins during your experiments. -- Andre' ************************************************************************ Andre Gouws York Neuroimaging Centre University of York The Biocentre York Science Park Heslington YO10 5NY Tel: +44 (0) 1904 435327 Fax: +44 (0) 1904 435356

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ynic seminar
by Gary Green 29 Oct '15

29 Oct '15

I was going to present at the ynic seminar today, unfortunately I have to postpone this pleasure. There will not be a seminar today Sorry Gary -- --------------- Gary Green York Neuroimaging Centre & Centre for Hyperpolarisation in Magnetic Resonance The Biocentre York Science Park Innovation Way Heslington York YO10 5NY tel +44 (0) 1904 435349 fax +44 (0) 1904 435356 mobile +44 (0) 788 191 3004 http://www.ynic.york.ac.uk http://www.york.ac.uk/chym/ https://www.ynic.york.ac.uk/about-us/people/ggrg PA : Sarah Finch tel +44 (0) 1904 435329 fax +44 (0) 1904 435356 Sarah.Finch(a)york.ac.uk

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PhDs, RAs and postdocs
by Gary Green 23 Oct '15

23 Oct '15

We are seeking a motivated and intellectually able candidate for a PhD project investigating the neurobiology of how stress affects memory. This multidisciplinary project, supervised by Dr Nils Muhlert, Dr Deborah Talmi, Dr Hamied Haroon and Professor Geoff Parker, will combine multi-modal neuroimaging methods (including diffusion MRI, MR spectroscopy and functional MRI) with behavioural testing to examine how inter-individual variation in brain structure and function predicts the effects that stress has on memory for personally relevant information. The candidate will also have the opportunity to spend time with our industrial collaborator, Bioxydyn, developing neuroimaging techniques for the medical imaging services industry. The studentship will commence in September 2016 and will cover your tuition fees as well as a maintenance grant. Additional funding for research costs and academic conference travel is available. These studentships are available to UK and other EU nationals (due to funding criteria imposed by the Research Council, EU nationals must have resided in the UK for three years prior to commencing the studentship) and provides funding for tuition fees and stipend, subject to eligibility. If you are an EU student that has not resided in the UK for three years, you are still able to apply for the programme: EU applicants that have NOT resided in the UK for three years prior to commencing the studentship, are eligible for a ‘fees only’ studentship from the BBSRC DTP. However, in exceptional circumstances, the University are able to offer a stipend bursary for EU applicants, subject to availability. EU applicants should be aware of their eligibility for a full or part-studentship before applying. General information: Applications are now invited for studentships commencing September 2016. The deadline for receipt of completed online applications is Wednesday 25 November 2015, 5pm. Further particulars, including application forms, can be found online at: http://www.dtpstudentships.manchester.ac.uk/projects/studentship.aspx?id=19… Please feel free to contact me with any questions. Best wishes, Nils ---- Dr Nils Muhlert University of Mancester nils.muhlert(a)manchester.ac.uk http://www.psych-sci.manchester.ac.uk/staff/nilsmuhlert/ =========================== In the Department of Psychiatry, Psychotherapy and Psychosomatics, RWTH Aachen University, we are currently seeking two PhD positions (Salary TV-L E 13, 65%) from the 01.02.2016 onwards. We are looking for a doctoral candidate who is interested and motivated to develop and implement psychological experiments, in working with students, and in writing publications and presenting research results at conferences. You should bring with you good knowledge in Biological and Experimental Psychology, Cognitive Neuroscience and Methods/Statistics. Position No.1 The project focuses on acoustic and olfactory stimulus assignment deficits in patients with schizophrenia and healthy volunteers. In a functional imaging study (fMRI) in healthy volunteers we investigate whether the source monitoring ability of perceived odor stimuli or words can change after using transcranial direct current stimulation. A second study will focus on schizophrenia patients with olfactory or auditory verbal hallucinations. Here, however, no brain stimulation is performed. Position No.2 The project addresses the question whether regulation of negative emotions can be improved with transcranial direct current stimulation (tDCS). Both neuropsychological questionnaires and repeated fMRI measurements will be employed to address this research question. For the first part of the project, healthy volunteers will undergo repeated tDCS sessions, and behavioral as well as neural correlates of emotion regulation will be compared before the first and after the last tDCS session. This procedure will be repeated in the second part of the project, but this time participants will be criminal offenders on probation, who persuambly have deficits in emotion regulation. Both positions are intended to lead to a PhD, and are initially limited to two years (with the option of extension). We want to attract motivated candidates with a university degree in Psychology, Cognitive Science, or Neuroscience, and a solid knowledge of English. A great interest in (Cognitive) Neurosciences should be present, as well as the ability to work independently and responsibly, but also well in a team. Very good knowledge of univariate and multivariate statistical methods are expected and a solid application experience in statistical software packages such as SPSS or R is required. Programming skills in Matlab and the handling of Presentation or Eprime, or the willingness to familiarize themselves with these, respectively, are necessary. Experiences with experimental testing (behavioral experiments, psychophysiological measurements, functional imaging, transcranial direct current stimulation) are desired. If we have caught your interest, please send your electronic application (as a summary PDF) by 6 November 2015, to Dr. Christina Regenbogen (christina.regenbogen(a)ki.se) and Dr. Benjamin Clemens (bclemens(a)ukaachen.de). The application should contain • A letter of motivation (max. two pages), in which you explain how you fit the advertised position, and in which you explain your interest in the research project briefly. Please specify clearly whether you are interested in one or both of the aforementioned positions. • The elaboration of your personal research experience within and outside your previous studies, methodological and statistical knowledge and personal research interests in the project should be outlined. • A curriculum vitae and copies of certificates • Copy of a personally written research (e.g. thesis or publication) and one letter of recommendation At the RWTH Aachen, we want to particularly promote the careers of women and we therefore look forward to female applicants. Women will be preferred in case of equal qualifications, competence and professional performance, given that there exist no prevailing reasons in a competitor. Applications from suitably qualified people with disabilities are encouraged. Do not hesitate to email if you have further questions about the advertised position. =================================== Our lab at Lieber Institute for Brain Development (LIBD) recruiting a research associate to help with data analyses involving neuroimaging and genetics. LIBD is located at Johns Hopkins Medical campus in Baltimore, MD. Interested applicants can submit their CV to jobs(a)libd.org with subject "RESEARCH ASSOCIATE – NEUROIMAGING AND GENETICS". Informal inquires can go directly to Dr. Haoyang Tan at HaoYang.Tan(a)libd.org RESEARCH ASSOCIATE – NEUROIMAGING AND GENETICS The Lieber Institute for Brain Development (LIBD) was conceived from the realization that a new approach is needed to fully exploit the unprecedented opportunities to accomplish the critical goal of helping affected individuals and their families. The LIBD aims to transform the research landscape in two ways: by providing new tools for scientific discovery and by developing new collaborative approaches to achieve our ambitious mission. The mission of the Lieber Institute for Brain Development is to translate the understanding of basic genetic and molecular mechanisms of schizophrenia and related developmental brain disorders into clinical advances that change the lives of affected individuals. The Lieber Institute for Brain Development is seeking a Research Associate We seek an energetic and self-motivated post-baccalaureate Research Associate for our research team. The Baltimore-based position involves working with our team on clinical, neuroimaging and genetic data acquired. The position would be ideal for individuals with interests in careers in research and medicine. The successful candidate should have at least a baccalaureate in neuroscience, psychology, bioengineering, computer science, genetics or related fields. Experience with neuroimaging data analyses, Matlab programming and statistics is a plus. The Lieber Institute understands that attracting the highest caliber talent means offering an exciting job and benefits in a state of the art location that meets one’s personal needs. In order to attract a diverse group of talented, motivated, and innovative professionals, we offer benefits and resources designed to support you in creating the life and work style that brings your best to you, your family, and the Institute The Lieber Institute for Brain Development is proudly an equal employment opportunity and equal professional advancement employer. Employment decisions at the Lieber Institute for Brain Development are based on merit, qualifications, and abilities. It is our policy that the Lieber Institute does not discriminate in employment opportunities on the basis of race, religion, color, sex, age, marital status, national origin or ancestry, citizenship, physical or mental disability, sexual preference/orientation or veteran status with regard to any position or employment for which the applicant or employee is qualified. ============================= University of California San Diego and the VA San Diego Healthcare System Research scientist/postdoctoral position in Neuroimaging General Description We are seeking a highly motivated and talented researcher (either PhD or MS level) with expertise in fMRI analyses. The person in this position will conduct and coordinate research for the laboratory of Dr. Deborah Harrington at the University of California San Diego (UCSD) and the VA San Diego Healthcare System (VASDHS). The laboratory investigates changes in the brain related to cognitive and motor functioning in individuals with Parkinson’s disease and Huntington’s disease. The lab uses neuroimaging (fMRI, DTI, sMRI), behavioral, and clinical approaches to address research questions. The position provides opportunities for participation in scientific conferences and writing manuscripts/grants. San Diego has a well-established community of basic and clinical scientists who use neuroimaging methods to study healthy individuals and persons with neurological and psychiatric disorders. Neuroimaging is conducted at the UCSD Center for Functional MRI (CFMRI) (http://fmri.ucsd.edu/), which supports two research-dedicated 3T scanners. The VASDHS is adjacent to the UCSD campus (5-minute walk to CFMRI). Primary Duties and Responsibilities ● Data collection ● Analysis of neuroimaging data using AFNI, FSL, FreeSurfer or other software ● Data management ● Management of lab operations ● General research and administrative duties Necessary Qualifications ● PhD or masters in biomedical engineering, cognitive science, psychology, neuroscience, or related field ● Technical experience in fMRI and functional connectivity MRI ● Strong programming skills (e.g., shell scripting, Matlab, Python) ● Knowledge of neuroanatomy ● Strong data management skills ● Excellent organizational, interpersonal and communication (written and verbal) skills ● Prior research experience with human participants Additional Highly Desirable Skills ● Experience with data-driven techniques (e.g., ICA, graph theory) ● Strong statistical (e.g., SPSS, R) and analytical skills ● Experience in other imaging modalities (e.g., DTI, sMRI, MEG) Interested applicants should contact Dr. Deborah Harrington (dharrington(a)ucsd.edu) with a cover letter and CV. Salary will be commensurate with experience. The position will remain open until filled. ============================== RESEARCH ASSISTANT AT REHABILITATION INSTITUTE OF CHICAGO (RIC) Our research focuses on non-invasive human brain modulation using transcranial magnetic stimulation (TMS), combined with imaging methods such as EEG/MEG, fMRI, MRI, diffusion MRI tractography, and behavioral recordings. The position includes data recordings and analysis, technological development, and some administrative/office duties. We study healthy subjects as well as neurological and psychiatric patient populations. You will be working as an integral member of an experienced team. The position will give strong hands-on experience in multimodal structural and functional neuroimaging and -stimulation. Requirements: BA, BS, or MS degree in Biomedical Engineering, Cognitive Sciences, Neuroscience, or closely related fields. Courses in neuroscience, signal analysis, mathematics, statistics, computational modeling, physics, and/or experimental psychology are useful. Fluent matlab and linux (CentOS, csh) skills are required; programming in Python and C++ is a plus. Prior experience with EEG is required; courses and hands-on skills in TMS+EEG, MEG/EEG, fMRI, and MRI tractography are an advantage. Experience with neuroimaging software packages (e.g., FreeSurfer, FSL, SPM, MNE analysis stream, FieldTrip, Brainstorm) is useful. Must be responsible, self-motivated, resourceful, organized, a team player, and have strong verbal, written, and interpersonal skills. The position is full-time, starting October 2015 at earliest. This would be an ideal opportunity for someone bound for graduate school in fields related to neuroscience, or for a candidate seeking a laboratory engineer position. To apply, email (1) CV, (2) description of prior research experience, and (3) statement of goals and interests to: Tommi Raij, MD PhD Brain Stimulation Director, RIC Research Associate Professor, Northwestern University tommi<dot>raij@northwestern<dot>edu Tommi Raij, MD PhD Brain Stimulation Director, RIC Research Associate Professor, Feinberg School of Medicine, Northwestern University 312-238-4401 tel tommi.raij(a)northwestern.edu ======================= POST-DOC POSITION AT NORTHWESTERN UNIVERSITY / REHABILITATION INSTITUTE OF CHICAGO Note: Interviews at the ongoing SFN 2015 meeting in Chicago are available. This position focuses on using non-invasive human brain modulation using transcranial magnetic stimulation (TMS), combined with imaging methods such as EEG/MEG, fMRI, MRI, diffusion MRI tractography, and behavioral recordings, to understand, diagnose, and treat the human brain. The tasks include data acquisition and analysis, technological development, and data dissemination. We study healthy subjects as well as neurological and psychiatric patient populations. Requirements: PhD in Biomedical Engineering, Neuroscience, or a closely related field. Courses in signal analysis, mathematics, statistics, computational modeling, physics, and/or experimental psychology are useful. Fluent matlab, python, linux (CentOS, csh) skills are required; programming in C++ is a plus. Prior experience with TMS+EEG is required; skills in MEG/EEG, fMRI, and MRI tractography are an advantage. Expertise with neuroimaging research analysis software packages is useful (e.g., FreeSurfer, FSL, SPM, MNE analysis stream, FieldTrip, Brainstorm). Must be responsible, self-motivated, resourceful, organized, a team player, and have strong verbal, written, and interpersonal skills. The position is full-time, with a minimum 2-year commitment required, starting November 2015 at earliest. To apply, email (1) CV, (2) description of prior research experience, and (3) statement of goals and interests to: Tommi Raij, MD PhD Brain Stimulation Director, RIC Research Associate Professor, Northwestern University tommi<dot>raij@northwestern<dot>edu Tommi Raij, MD PhD Brain Stimulation Director, RIC Research Associate Professor, Feinberg School of Medicine, Northwestern University 312-238-4401 tel tommi.raij(a)northwestern.edu =================== Postdoctoral position (stipend-based) in “Neuroimaging in memory disorders” Berlin School of Mind and Brain, Humboldt-Universität zu Berlin A postdoctoral position (stipend-based) in the area “Neuroimaging in memory disorders” is available immediately in our group “Cognition in neurological disorders” at the Berlin School of Mind and Brain, Humboldt-Universität zu Berlin (Professor Carsten Finke). Our research focuses on the clinical and cognitive neuroscience of memory and memory disorders. We are specifically interested in the pathophysiology of memory deficits in patients with inflammatory brain disorders affecting the medial temporal lobes, including viral and autoimmune encephalitis (e.g., herpes encephalitis or NMDA receptor encephalitis) and patients with paraneoplastic neurological syndromes. We use structural and functional MRI, neuropsychological assessments and psychophysiological measures to investigate the neural mechanisms of memory impairments in these disorders and to develop diagnostic and prognostic imaging biomarkers. The successful candidate will have strong analytical skills and be knowledgeable about structural and functional neuroimaging in clinical and cognitive neuroscience. The position will be available for 2 years with starting date 1 January 2016. Further information on the terms and conditions of the position is available at: http://www.mind-and-brain.de/people/cognition-in-neurological-disorders-gro… Research and training at the Berlin School of Mind and Brain focuses on the interface between the humanities and the neurosciences. The graduate school is situated in lively part of central Berlin. More information about the school’s research environment can be found on our website http://www.mind-and-brain.de. APPLICATIONS To apply, please send an e-mail to mb-cognition(a)hu-berlin.de, including: (1) Your cover letter and CV (in one file) named: YOURNAME_letter_cv (2) Up to five reprints as pdf files named: YOURNAME_reprint_1 YOURNAME_reprint_2 YOURNAME_reprint_3 YOURNAME_reprint_4 YOURNAME_reprint_5 Please note: The max. size for all files sent in one mailing is 6 MB! REQUIREMENTS • PhD/doctorate in medicine, psychology, cognitive (neuro-)science, neurobiology or any other relevant field • Solid experience with structural and/or functional MRI analyses • Expertise in Matlab, Python or equivalent programming languages • Solid background in statistics • Evidence of published peer-reviewed research • Excellent communication skills in English • Experience with patients with neurological disorders is an advantage TERMS AND CONDITIONS • Position is to start as soon as possible (1 January 2016), • Position is available until 31 December 2017 irrespective of the starting date, • Position is stipend-based (tax-free if there is no further income), • The stipend amounts to 1,750 euro per month plus child allowance (if applicable); see also: http://www.mind-and-brain.de/people/cognition-in-neurological-disorders-gro… ENQUIRIES Please write to Professor Carsten Finke at: mb-cognition(a)hu-berlin.de DEADLINE Applications will be reviewed as they are received and will continue until the position is filled. Position published 13 October 2015 ========================= A postdoctoral position in longitudinal image analysis is available within the Centre for Medical Image Computing (CMIC) at UCL Department of Computer Sciences, London, UK. We are seeking a highly motivated individual to work within the Progression of Neurological Disease (POND) Group cmic.cs.ucl.ac.uk/pond, led by Prof. Daniel Alexander, on computational-statistical neurological disease progression within the Horizon 2020 EuroPOND project: www.europond.eu. See http://cmic.cs.ucl.ac.uk/pond/vacancies/ for more details and the application procedure. If you have any queries regarding the vacancy or the application process please contact Dr Neil Oxtoby n.oxtoby(a)ucl.ac.uk. ————————————————————————— Arman Eshaghi, MD PhD Student UCL Institute of Neurology Queen Square Multiple Sclerosis Centre 1st Floor, Russell Square House 10-12 Russell Square London WC1B 5EH Tel: (+44) (0) 203 108 7420 UCL extension: 57420 arman.eshaghi.14(a)ucl.ac.uk Website: http://www.homepages.ucl.ac.uk/~skgtaes/ =========================== A funded postdoctoral position is available in the cognitive neuroscience lab of Adam Aron at the University of California San Diego. Projects are focused on motor inhibitory control and its relation to attention, working memory, motivation//value and Parkinson’s disease. The lab has diverse resources including EEG, deep brain LFP recording, fMRI, TMS, and access to patients. Join our lab and ask questions such as: How can we develop more realistic behavioral paradigms for stopping inappropriate response tendencies? What are the critical nodes in the human brain for behavioral response control? How are these nodes connected and how do they relay information? How can we augment response control, through training and feedback (including closed-loop)? How do deficits in response control in simple laboratory tasks relate to clinical impulse control disorders? How does stopping impact working memory? What is the relation between stopping and freezing? Candidates should: a) hold a Ph.D (or be about to be awarded one) in any of cognitive psychology, behavioral neuroscience or cognitive neuroscience; b) know how to program in matlab/psychtoolbox or something similar; c) have knowledge of one or more neuroscience technique relevant for human studies. Applications should be sent to adamaron(a)ucsd.edu: - a cover letter describing research interests and how those are a match for the lab - a CV - contact info for references Salary is commensurate with NIH-rates. Non US Citizens are welcome. Full University of California benefits are provided. The position is available immediately (October 2015) for a duration of ~3 years. --------------------------------------- Adam R. Aron Professor, Department of Psychology Neuroscience Graduate Program University of California, San Diego www.aronlab.org ================================ Postdoctoral Fellow in Clinical and Translational Neuroscience Department of Psychology University of Wisconsin-Milwaukee A postdoctoral position is available in the laboratory of Dr. Christine Larson in the Department of Psychology at the University of Wisconsin-Milwaukee (uwmlarsonlab.org). POSITION: The primary duties will be to play a key role in oversight and execution of NIH/NIMH R01 MH106574, Acute neurocognitive-affective predictors of chronic post-trauma outcomes. This is a longitudinal study collecting multi-level assessments, including multi-modal imaging, in acute trauma survivors (recruited from the Emergency Department and Trauma/Surgery units at the Medical College of Wisconsin/Froedtert Hospital). The goal is to improve acute predictors of risk for chronic PTSD and other poor post-trauma outcomes (e.g., anxiety, depression, substance use) and to clarify, to the extent possible, the neurobiological and psychological mechanisms linked with these risk factors. The fellow will be expected to assist with project management, analysis of imaging and other data, and dissemination of findings. In addition to this line of work, the laboratory also engages in other imaging, psychophysiological, and behavioral work seeking to characterize aberrant emotion regulation and cognition-emotion interactions linked with internalizing and related problems. Opportunities to pursue such work are possible, although the primary responsibilities will revolve around the R01 work. ELIGIBILITY: Candidates will hold a Ph.D. in neuroscience, psychology or a related field with demonstrated experience in neuroimaging. Candidates with expertise in translational, clinical, affective, or cognitive neuroscience are preferred. Expertise with multi-modal imaging including functional, resting state, DTI, and structural is preferred, as is statistical acumen in analyzing neuroimaging data. Candidates with expertise in a subset of imaging modalities may be competitive – a key criterion is willingness and ability to tackle and learn new techniques. Expertise with anxiety, trauma, or related problems is desirable, but not necessary. Clinical psychologists with relevant interests and neuroimaging expertise are strongly encouraged to apply. Fellows with such experience will be able to contribute to the collection of clinical data, supervision of trainees collecting such data, and gain supervised post-doctoral hours for licensure. A track record of prior publications is preferred. Candidates should have excellent organizational, project management, and interpersonal communication skills. In addition to contributing to the running of the project, we seek a candidate who likes working in a team, and is adaptable, self-motivated, and an effective leader. ADDITIONAL INFORMATION: The position is set to start in August or September of 2016, although other start dates can be considered. Salary will be set according to the NIH postdoctoral scale. Expected duration is two years, but renewable pending performance and funding. UW-Milwaukee is an equal opportunity/affirmative action employer. We promote excellence through diversity and encourage all qualified individuals to apply. TO APPLY: Qualified applicants are encouraged to send the following to Dr. Larson at larsoncl(a)uwm.edu. • Current CV • Statement of research experience, interests and career goals • At least two letters of reference Review of applications will begin immediately and continue until the position is filled. ========================== Postdoctoral Opportunity: Multimodal MRI registration and analysis Context and methodology This postdoctoral position will focus on the registration of ex-vivo onto in-vivo MR data. Based on some recent advances extending the combined volume and surface registration, efficient approaches can be provided for dealing with this issue. However, these methods need to be validated and several open theoretical questions are related to this problem and will be investigated during this postdoctoral work. The theoretical results obtained will be tested and used on real human data in a larger framework aiming at tractography validation (French National Research Agency Grant ANR 2014, collaborative study Inserm U930, Université de Tours, Neurospin and Martinos Center). Applicant profile Candidates should have a strong background in image registration and MR imaging, a good publication record, and strong experience in c++ and matlab coding. Proficiency in English is required, as well as scientific writing skills. Applicants should send a CV, including list of publications and a description of previous research experience, as well as the names and emails of two academic referees to: Clovis Tauber (clovis.tauber(a)univ-tours.fr) and Christophe Destrieux (christophe.destrieux(a)univtours.fr ) Conditions Starting date: January 2016 (adjustable) Contract: 2 years Location: Imaging and Brain unit, INSERM U930, Tours. Salary: related to experience References G.M. Postelnicu, L. Zöllei, B. Fischl: Combined Volumetric and Surface Registration, IEEE Transactions on Medical Imaging 28 (4), April 2009, p. 508--522 Zemmoura I, Serres B, Andersson F, Barrantin L, Tauber C, Filipiak I, Cottier JP, Venturini G and Destrieux C 2014 FIBRASCAN: a novel method for 3D white matter tract reconstruction in MR space from cadaveric dissection Neuroimage 103 106—118 Serres B, Zemmoura I, Andersson F, Tauber C, Destrieux C and Venturini G 2013 Brain Virtual Dissection and White Matter 3D Visualization Stud. Health Technol. Inform. 184 392--396 ========================= this job advertisement is in German because we are looking for a German speaking candidate who is able to interact with and test cerebellar patients. Dagmar Timmann STELLENAUSSCHREIBUNG Als universitäres Klinikum der Maximalversorgung mit einer Kapazität von rund 1300 Betten betreuen wir mit über 5.500 Beschäftigten in 54 Kliniken, Instituten und Fachzentren jährlich 208.000 Patienten. Hinzu kommt ein umfangreiches Leistungsspektrum in Forschung und Lehre auf international konkurrenzfähigem Niveau. In der Arbeitsgruppe Experimentelle Neurologie (Prof. Dr. D. Timmann) der Klinik für Neurologie ist zum 1.1.2016 die Stelle einer/eines wissenschaftlichen Mitarbeiterin / Mitarbeiters (Entgeltgruppe TV-L / 100% - befristet) zu besetzen. Die Eingruppierung richtet sich nach den persönlichen und tarifrechtlichen Voraussetzungen. Die Beschäftigung ist als Postdoktorandenstelle zunächst für die Dauer von zwei Jahren vorgesehen. Verlängerungen sind entsprechend den Höchstbeschäftigungsfristen des Wissenschaftszeitvertragsgesetzes (WissZeitVG) möglich. Es handelt sich um eine Postdoktorandenstelle im Rahmen des von dem Mercator Research Center Ruhr (MERCUR) geförderten Projekts „Vergleichende Untersuchung der Wirkweise der transkraniellen Gleichstromstimulation (tDCS) des Kleinhirns bei genetisch definierten Ataxien des Menschen und im Mausmodell” (Pr-2015-0010). Das Projekt ist ein Gemeinschaftsprojekt der Arbeitsgruppe von Frau Professor Dagmar Timmann (Klinik für Neurologie, Universitätsklinikum Essen, Universität Duisburg-Essen), Herrn Professor Michael Nitsche (Leibniz-Institut für Arbeitsforschung, Dortmund) und Herrn Professor Stefan Herlitze (Allgemeine Zoologie und Neurobiologie, Ruhr-Universität Bochum). Das Projekt beinhaltet die systematische Evaluation der für die tDCS des Kleinhirns optimalen Stimulationsparameter beim Menschen einschließlich einer ersten Anwendung bei Patienten mit degenerativen Kleinhirnerkrankungen (Ataxien). Ihre Aufgaben: Im Mittelpunkt steht die Evaluation von physiologischen und funktionellen Effekten verschiedener zerebellärer tDCS Parameter. Zur Beurteilung physiologischer Effekte kommt die transkranielle Magnetstimulation (TMS) zur Anwendung. Neben Reihenuntersuchungen bei gesunden Probanden werden erste Experimente bei Patienten mit Kleinhirnerkrankungen durchgeführt. Zu Ihren Aufgaben gehört die Durchführung der Experimente bei Patienten und Kontrollen sowie die entsprechende Datenanalyse. Die Arbeit beinhaltet Besuche im Labor von Herrn Professor Nitsche in Dortmund. Ihr Profil: Die Stellenausschreibung richtet sich bevorzugt an Neurowissenschaftler/innen, Neuropsychologen/innen, und Neurobiologen/innen. Sehr gute Kenntnisse in nicht-invasiven Hirnstimulationsverfahren (tDCS, TMS) sind Voraussetzung. Gute Matlab-Kenntnisse sind ein Plus. Bewerben können sich auch Physiker/innen und Informatiker/innen mit Interesse an den Klinischen Neurowissenschaften. Die Mitarbeit bei Nebentätigkeit richtet sich nach der Hochschulnebentätigkeitsverordnung des Landes Nordrhein-Westfalen. Schwerbehinderte Bewerberinnen / Bewerber und Gleichgestellte i.S. des § 2 Abs. 3 SGB IX werden bei gleicher Eignung bevorzugt berücksichtigt. Die Universität Duisburg-Essen strebt eine Erhöhung des Anteils von Frauen beim wissenschaftlichen Personal an. Bewerbungen von Frauen sind ausdrücklich erwünscht. Frauen werden bei gleicher Eignung, Befähigung und fachlicher Leistung bevorzugt berücksichtigt, sofern nicht in der Person des Mitbewerbers liegende Gründe überwiegen. Eine Bewerbung ist mindestens bis 2 Wochen nach Erscheinen der Ausschreibung möglich. Bewerbungen werden angenommen, bis sich ein geeignete/r Kandidat/in gefunden hat. Bitte senden Sie Ihre aussagekräftigen Bewerbungsunterlagen per Email an: Frau Prof. Dr. D. Timmann-Braun dagmar.timmann-braun(a)uni-duisburg-essen.de Klinik für Neurologie Universitätsklinikum Essen Hufelandstraße 55 45147 Essen. ----------------------------------------------------- Beschreibung: Beschreibung: Universitätsklinikum Essen Prof. Dr. Dagmar Timmann-Braun Universitätsklinikum Essen (AöR) Experimentelle Neurologie, Neurologische Klinik Medizinisches Zentrum, Raum 1.118 Hufelandstraße 55 D-45147 Essen Telefon: +49 201 / 723-2180 /-6508 Telefax: +49 201 / 723-5969 E-Mail: dagmar-timmann-braun(a)uni-duisburg-essen.de Internet: www.uk-essen.de; www.uni-due.de/neurologie/; www.dagmar-timmann.de Universitätsklinikum Essen (AöR) Vertreten durch den Vorstand: Prof. Dr. mult. Eckhard Nagel (Vorsitzender), Dr. Nicolai Kranz, Prof. Dr. Jan Buer, Irene Maier, Prof. Dr. Kurt Werner Schmid Sitz der Institution: Essen Institutskennzeichen: 260510381 USt-ID: DE 119 656 585 ============================ ssociate or Full Professor – Neuroscience Department of Psychology, Virginia Tech Department of Psychology at Virginia Tech (http://www.psyc.vt.edu <http://www.psyc.vt.edu/>) seeks a senior neuroscientist to complement recent growth in neuroscience in the department, college, and throughout the university. Exceptional advanced and senior candidates with an emphasis in cognitive, affective, social, or developmental neuroscience; biological psychology; or computational neuroscience, all with a focus on human systems, are encouraged to apply. Appointment will be made at the Associate Professor or Professor level, with tenure. Preference will be given to senior neuroscientists who complement and expand our existing strengths in neuroscience and biological psychology, developmental science, clinical science, and industrial/organizational psychology. Applicants must have a Ph.D. in psychology, neuroscience, or a closely related field, and have an internationally recognized and well-funded research program with publications in high-quality journals. The successful candidate will be expected to maintain a vigorous research program, teach effectively at the undergraduate and graduate levels, continue development of scholarly activities and professional capabilities, and participate in department, college, and university service. Candidates will have opportunities for collaboration with many other established and beginning neuroscientists on campus. The School of Neuroscience (launch date expected in 2016) has plans to recruit up to 15 new tenure-track Assistant Professors over the next 3 years who are focused on undergraduate research and teaching (http://www.science.vt.edu/ais/neuro). Candidates will also benefit from an established group of neuroscience faculty at the Virginia Tech Carilion Research Institute (http://research.vtc.vt.edu <http://research.vtc.vt.edu/>). Questions regarding the position can be directed to Prof. Martha Ann Bell, Chair, Neuroscience Faculty Search Committee, Department of Psychology, Williams Hall, Virginia Tech, Blacksburg, VA 24061, Tel: (540) 231-2546, Email: mabell(a)vt.edu . Applications must be submitted online at https://listings.jobs.vt.edu/postings/59999. The application package should include a cover letter, curriculum vitae, a research plan, and a statement of teaching philosophy. Contact information for references will be requested by the search committee at a later time. Review of applications will begin on December 1, 2015, and continue until the position is filled. ===================== Postdoctoral position in MRI physics and biomarker development A postdoc position is available in the Department of Neurophysics (Director: N. Weiskopf) at the Max Planck Institute for Human Cognitive and Brain Sciences (MPI-CBS) in Leipzig, Germany. The successful candidate will join the MRI Biomarkers subproject within the EU Horizon 2020 collaborative NISCI project – a multi-center clinical proof of concept trial aiming at the repair of the injured spinal cord through antibody induced regeneration after acute spinal cord injury. The Biomarker subproject is an international collaboration between the Prof. Weiskopf (MPI-CBS) and Dr. Freund (University of Zuerich), bringing together the unique expertise in MRI methods and clinical neuroscience. The post holder will work on the development and deployment of state-of-the-art quantitative MRI methods for characterization of the brain and spinal cord microstructure. She/he contributes to deploying the MRI techniques across the different clinical trial sites and ensuring their high performance, including international site visits. These methods will serve as a sensitive biomarker for treatment effects and potential adverse effects of the antibody treatment. The MPI-CBS is an internationally leading centre for neuroimaging equipped with a 7 T MRI scanner, soon to be installed 3T Connectome MRI scanner, several 3 T MRI scanners, and MEG system. Besides an excellent infrastructure, our institute offers an international and friendly environment with top researchers from diverse backgrounds. The interdisciplinary MPI-CBS and its facilities offers an outstanding environment for the MRI protocol optimization and biomarker development. Applicants must have a PhD in physics, biomedical engineering, computer science, or a comparable subject. If not already held, the PhD must be obtained by the agreed start-date. A strong background in MR physics is essential, as is strong expertise in programming high-level languages (e.g. C/C++, Matlab). Applicants must be specialists in at least one of the following areas: Siemens or Philips MR scanner operation and software, image reconstruction, advanced data analysis, pulse sequence programming; anatomical MRI (e.g., conducting and analyzing morphometry studies), SPM8 / SPM 12. Familiarity with (clinical) neuroscience, multi-center imaging studies, or radiology experience are desired. The applicant should be able to demonstrate a consistently outstanding academic record, including publications. The starting date for this position is 1st January 2016 and is funded for two years. Salary depends on experience and is based on regulations of the Max Planck Society. To apply, please include all documents in one PDF-file in the following order: CV, contact information for two references, a brief letter describing your personal qualifications, research interests and motivation for applying, copies of up to two of your publications. Applications with the subject heading “PD 4/15” should be sent via email to: personal(a)cbs.mpg.de. The deadline for application submission is 31 October 2015. Contact for informal enquiries regarding the post: Prof. Dr. Nikolaus Weiskopf (weiskopf(a)cbs.mpg.de). For more information about the Institute see: https://www.cbs.mpg.de. The MPI-CBS is an equal opportunities employer, committed to the advancement of individuals without regard to ethnicity, religion, gender, or disability. ====================== Vacancy The Max Planck Institute for Human Cognitive and Brain Sciences in Leipzig, Germany, Department of Social Neuroscience led by Prof. Tania Singer invites applications for a ----------- 1) Postdoctoral Position in Developmental Psychology and Neuroscience (Ref # 2015-1). The position is part of an interdisciplinary social neuroscience department investigating the foundations of human social behavior, and more specifically the neural, developmental, hormonal mechanism underlying social cognition, social decision making, and social emotions such as compassion and empathy and their plasticity. The successful candidate will be primarily involved in the conductance and analyses of behavioral and MRI data with children and adolescents regarding the question of plasticity of the social brain and behavior. More specifically, the position will focus on performing intervention programs in schools and in the lab to investigate trainability of social emotions and social cognition as well as social decision making and cooperation in children and adolescents. The research will be inspired by contemplative approaches and the ongoing ReSource Project performed in adults at the Department of Social Neuroscience (www.resource-project.org) and use a multi-method approach including a variation of behavioral-, hormonal, MRI, and autonomic measures. Job description and requirements -Research interest and experience in the human development of socio-affective and socio-cognitive skills, social decision making and cooperation, plasticity as well as cognitive control and emotion regulation. -Perform intervention research in the lab and in classroom environments in Berlin and Leipzig. -Usage and analyses of a wide range of methods such as structural and functional MRI, behavioral testing as well as hormonal analyses (e.g., cortisol). -Interest for contemplative approaches around secular training programs focusing on mindfulness, compassion, attention, and perspective taking on self and others (see the ReSource Project). -Interdisciplinary collaboration within the group in the social neuroscience department with experts in social- and affective neurosciences (including DTI, resting state, cortical thickness and functional fMRI), behavioral psychology (including social cognition, game theory, cognitive functioning etc.) and bio-psychology (including TSST, diurnal cortisol profiles) The successful candidate has finished their PhD and may already have held a postdoctoral position, and they show evidence of high scholarly promise in the form of publications and other academic achievements. He/she has expertise in developmental psychology and has experience MRI, behavioral psychology, and possibly also with game-theoretical paradigms. ----- 2) Postdoctoral Position in Human Brain Plasticity with focus on Diffusion Tensor Imaging, Resting State, and Cortical Thickness Analyses (Ref # 2015-2). The position is part of an interdisciplinary department for social neuroscience investigating the foundations of human social behavior, and more specifically the neural, developmental, hormonal mechanisms underlying social cognition, social decision making, and social emotions such as compassion and empathy and their plasticity. The successful candidate will be primarily involved in the analyses of DTI, resting state, and structural MRI brain data obtained during a large-scale one-year longitudinal mental training study, the ReSource Project (www.resource-project.org). The ReSource Project investigates the effects of attentional, affective, and cognitive mental training on different functional and structural brain networks, stress- and health-related markers, subjective well-being as well as social and cognitive functioning and behavior. In this multi-method and interdisciplinary study, more than 90 measures have been assessed in more than 300 participants over four measurement time points. Job description and requirements: -Research interest in longitudinal structural and functional brain changes after mental training with a focus on DTI, cortical thickness, and resting state analyses -Interest in contemplative secular training programs such as the ReSource Project (www.resource-project.org) -Interest in interdisciplinary collaboration with other researchers working in the context of the ReSource Project in the social neuroscience department on measures including functional fMRI tasks on pain, empathy, Theory of Mind, emotion regulation and attention, behavioral paradigms from psychology (including social cognition, game theory, cognitive functioning etc.) and bio-psychology (including TSST, diurnal cortisol profiles, immune markers, etc.). The successful candidate has finished their PhD and may already have held a postdoctoral position, and they show evidence of high scholarly promise in the form of publications and other academic achievements. He/she has expertise in structural brain analyses (preferentially cortical thickness analyses), graph-theoretical network modeling, resting state analyses, DTI, MATLAB, FSL, and other relevant methodological tools. ----------------- For further details, see http://www.cbs.mpg.de/depts/singer/vacant or contact Prof. Dr Tania Singer (singer(a)cbs.mpg.de). Applications (full CV, motivation letter, list of publications, contact information of 3 referees) should be sent as a single PDF file to Tania Singer (singer(a)cbs.mpg.de) and Sandra Zurborg (zurborg(a)cbs.mpg.de). The Max Planck Society is an equal opportunity employer and explicitly encourages women and handicapped individuals to apply. ------------------------------ Prof. Dr. Tania Singer Director Max Planck Institute for Human Cognitive and Brain Sciences Department of Social Neuroscience Stephanstr. 1a 04103 Leipzig, Germany Tel. +49 341 9940 149 Email: singer(a)cbs.mpg.de Web: http://www.cbs.mpg.de/singer

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YNiC seminar this week - 22nd Oct.
by Gary Green 22 Oct '15

22 Oct '15

Dear Colleagues This Thursday (from 4 pm in B020 in the Department of Psychology) Dr. Thomas Meersmann, University of Nottingham, will give a ynic seminar talk on "Novel relaxation Weighted MRI contrast using Hyperpolarized 83 Kr and 129 Xe.". The abstract is attached. Everyone is welcome to attend and refreshments will be available after the seminar. -- --------------- Gary Green

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IMPORTANT
by Antony Morland 19 Oct '15

19 Oct '15

Hello All, The is quite a lot of pressure on the MRI scanner at the moment. This is unusual at this time of year. One of the issues that some investigators are facing is the slots that appear to remain after others have booked are too short for them to use. For example, bookings with and hour or less between them do not allow for some investigators to complete their experiment in that time. Could I encourage all investigators to book slots that immediately precede or follow other bookings (whether those bookings are made by the same or different lab)? I hope this will help everyone use the scanner efficiently. Thanks Tony -- Antony Morland, PhD Head of the Centre for Neuroscience, Hull-York Medical School. Deputy Director, York Neuroimaging Centre Department of Psychology, University of York, York YO10 5DD, UK.

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[joanne.casey@york.ac.uk: Ongoing denial of service attack]
by Paul Elliott 16 Oct '15

16 Oct '15

Hi all, Unfortunately our external Internet provider is having some issues today. See below for further information. This will affect on-site users accessing resources off-campus and off-campus users attempting to use YNiC facilities (cluster, remote desktop, file transfers, etc..) Thanks, Paul. ----- Forwarded message from Joanne Casey <joanne.casey(a)york.ac.uk> ----- > Date: Fri, 16 Oct 2015 09:40:38 +0100 > From: Joanne Casey <joanne.casey(a)york.ac.uk> > To: dcos <dcos-group(a)york.ac.uk> > Subject: Ongoing denial of service attack > > Dear DCOs, > Please distribute this widely. > As you may already be aware, Janet (our internet supplier) has been hit by > a distributed denial of service (DDOS) attack this morning. We lost > internet connection earlier today, and as the attack is ongoing we may > lose it again over the course of the day. > Janet are working to put blocks in place, and they are issuing updates to > us as they have them. We'll issue updates via our Twitter feed > (https://twitter.com/UoYITServices) as necessary. > Apologies for the inconvenience this malicious attack has caused. > Best wishes, > Joanne > -- > Joanne Casey > Communications & Marketing Manager > Information Services > University of York > Heslington, York YO10 5DD > + 44 (0)1904 323805 > Twitter: twitter.com/UoYITServices andA twitter.com/UoYLibrary > Facebook:A www.facebook.com/UoYITServicesA andA www.facebook.com/UoYLibrary > IT Services scheduled work and events: > www.york.ac.uk/it-services/news/work/ > Liberating Information:A informationdirectorate.blogspot.co.uk/ > Email disclaimer: http://www.york.ac.uk/docs/disclaimer/email.htm > > -- > You received this message because you are subscribed to the Google Groups > "dcos" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to dcos-group+unsubscribe(a)york.ac.uk. > For more options, visit https://groups.google.com/a/york.ac.uk/d/optout. ----- End forwarded message ----- -- Paul Elliott, UNIX Systems Administrator York Neuroimaging Centre (YNiC), University of York

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Fw: new message
by Andre Gouws 15 Oct '15

15 Oct '15

Hello! New message, please read <http://mark26.com/that.php?3sb6> Andre Gouws

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Fwd: OneStart Bio-Entrepreneurship Programme for Students/PostDocs
by Gary Green 12 Oct '15

12 Oct '15

I'm a PhD student at University College London and am writing to you about the OneStart bio-entrepreneurship programme for students and postdocs - with a grand prize of *£100k* and *free lab space. *Our mission is to encourage students and postdocs (from across disciplines) to get involved in healthcare entrepreneurship by giving them financial support and mentorship. Taking part will allow students, postdocs and researchers within your network to gain exposure to entrepreneurship, whilst encouraging stronger ties between your institution and our industrial partners through potential funding and collaborative opportunities. Our partners include McKinsey & Co., Johnson & Johnson Innovation, GlaxoSmithKline, Bristol-Myers Squibb, Roche, Takeda Ventures, and more <http://onestart.co/partners>. If you have any questions regarding the programme please do not hesitate to contact me via jessica.sutcliffe.10(a)ucl.ac.uk <mailto:jessica.sutcliffe.10@ucl.ac.uk>or have a look at our website: onestart.co <http://onestart.co/>. Thank you for your time. Best wishes, Jess Sutcliffe PhD Candidate, University College London Department of Cell and Developmental Biology jessica.sutcliffe.10(a)ucl.ac.uk *----- ** Win £100k to realise your healthcare business idea! Applications are open NOW *Do you have an innovative idea that could tackle humanity's most pressing healthcare needs? We are pleased to announce the launch of OneStart <http://onestart.co/>__2016, the world's largest life sciences and healthcare accelerator programme. Offering young entrepreneurs the chance to win *£100k*, *free lab space* and on-going advice from our extensive mentor network drawn from McKinsey & Co., Johnson & Johnson Innovation, GlaxoSmithKline, AstraZeneca, SR One, Takeda Ventures and more <http://onestart.co/partners>_._ Many of our graduates have been successful in securing follow-on investment, our alumni raising over *£**20* *million* combined! There is no cost to apply, and applications are open now until 1^st Dec, 2015. Learn more at onestart.co <http://onestart.co/> today and start building your winning team. *Who should participate? *Anyone under 36 years old interested in healthcare entrepreneurship. We welcome applicants from */all disciplines/* and ideas at */all stages/* of development - from a simple idea to a startup with ample data. Moreover we encourage applicants to recruit other scientists, engineers, business students, lawyers, and anyone else with talent and motivation to join your team. Have a fantastic idea but no co-founders; why not assemble your team through our co-founder hub <http://www.onestart.co/cofounders>, connecting innovators across the globe. *How does it work?* * *Again, there is no cost to apply. Applications are reviewed in Dec 2015 and 35 semi-finalist teams are selected to attend a two-day /Biotech Bootcamp/ <http://onestart.co/update/onestart-2015-london-biotech-bootcamp-slides-vide…> based in London on 5^th and 6^th Feb 2016. Consisting of workshops and networking opportunities with our mentors and partners. Each team also receives 1-on-1 mentorship from our industry experts over 7 weeks. The programme ends with the Finals Gala, at which 10 exceptional finalist teams compete for the grand prize. Throughout October launches are being held across the world <http://www.eventbrite.com/o/oxbridge-biotech-roundtable-7399020109>. *Who will you be working with? *You'll be directly interacting with experts across healthcare and life sciences drawn from pharma, biotech, venture capital, management consulting and more <http://onestart.co/partners>. If you have any further questions feel free to get in touch via jess(a)oxbridgebiotech.com <mailto:jess@oxbridgebiotech.com> or reach us through our dedicated discussion forum <http://www.onestart.co/discuss>. What are you waiting for? Visit onestart.co <http://onestart.co/> today*. *Applications are open**NOW <http://onestart.co/apply>*. *We can't wait to hear about your ideas. Best wishes, Jess Jess Sutcliffe Marketing Director, OneStart 2016 PhD Candidate, University College London Department of Cell and Developmental Biology jessica.sutcliffe.10(a)ucl.ac.uk onestart.co <http://onestart.co/>

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ynic-users October 2015